RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 SORCS3Q9UPU3 1222 aa16.98■□□□□ 0.31
ITGB1-204ENST00000417122 MYO10Q9HD67 2058 aa16.98■□□□□ 0.31
ITGB1-204ENST00000417122 POLR2DO15514 142 aaKnown RBP16.97■□□□□ 0.31
ITGB1-204ENST00000417122 ASGR2P07307 311 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 HNRNPA1P09651 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
ITGB1-204ENST00000417122 ADSSP30520 456 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 GUCY2FP51841 1108 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 SIGLEC14Q08ET2 396 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 MRPL58Q14197 206 aaKnown RBP16.97■□□□□ 0.31
ITGB1-204ENST00000417122 UVSSAQ2YD98 709 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 SPATA1Q5VX52 437 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 SLC8B1Q6J4K2 584 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 HFE2Q6ZVN8 426 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 SYCP3Q8IZU3 236 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 APPL2Q8NEU8 664 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 BEST2Q8NFU1 509 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 SLC7A14Q8TBB6 771 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 FGFBP2Q9BYJ0 223 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 TRIM9Q9C026 710 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 ASB7Q9H672 318 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 RCOR1Q9UKL0 485 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 DERAQ9Y315 318 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 HCN4Q9Y3Q4 1203 aa16.97■□□□□ 0.31
ITGB1-204ENST00000417122 TMEM221A6NGB7 291 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 M0R296 226 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 TBC1D4O60343 1298 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 N4BP1O75113 896 aaKnown RBP16.96■□□□□ 0.31
ITGB1-204ENST00000417122 NFICP08651 508 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 HOXA9P31269 272 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 GBP2P32456 591 aaPredicted RBP16.96■□□□□ 0.31
ITGB1-204ENST00000417122 POU5F1Q01860 360 aaKnown RBP16.96■□□□□ 0.31
ITGB1-204ENST00000417122 ROR1Q01973 937 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 MTMR3Q13615 1198 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 TMEM132DQ14C87 1099 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 CTXN3Q4LDR2 81 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 RESP18Q5W5W9 173 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 ZNF280DQ6N043 979 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 CRELD2Q6UXH1 353 aaPredicted RBP16.96■□□□□ 0.31
ITGB1-204ENST00000417122 ZNF461Q8TAF7 563 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 TMEM206Q9H813 350 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 MAGEF1Q9HAY2 307 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 PCDHB8Q9UN66 801 aa16.96■□□□□ 0.31
ITGB1-204ENST00000417122 M0QZQ0 153 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 CCL16O15467 120 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 PRPF6O94906 941 aaKnown RBP16.95■□□□□ 0.3
ITGB1-204ENST00000417122 LDHAP00338 332 aaKnown RBP16.95■□□□□ 0.3
ITGB1-204ENST00000417122 ARPP19P56211 112 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 ASIC1P78348 528 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 RTL10Q7L3V2 364 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 BMP8AQ7Z5Y6 402 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 UBALD2Q8IYN6 164 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 C7orf25Q9BPX7 421 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 FBXL5Q9UKA1 691 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 POLIQ9UNA4 740 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 ZDHHC9Q9Y397 364 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 C2CD2Q9Y426 696 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 TECTAO75443 2155 aa16.95■□□□□ 0.3
ITGB1-204ENST00000417122 WDR27A2RRH5 827 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 PPEF2O14830 753 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 XYLBO75191 536 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 ABLIM3O94929 683 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 GARTP22102 1010 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 ELF1P32519 619 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 AARSP49588 968 aaKnown RBP eCLIP16.94■□□□□ 0.3
ITGB1-204ENST00000417122 C9orf57Q5W0N0 161 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 CNNM4Q6P4Q7 775 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 DSTYKQ6XUX3 929 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 STXBP4Q6ZWJ1 553 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 GET4Q7L5D6 327 aaPredicted RBP16.94■□□□□ 0.3
ITGB1-204ENST00000417122 GRASPQ7Z6J2 395 aaPredicted RBP16.94■□□□□ 0.3
ITGB1-204ENST00000417122 HPS3Q969F9 1004 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 PBXIP1Q96AQ6 731 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 SAAL1Q96ER3 474 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 MFSD14AQ96MC6 490 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 MYADMQ96S97 322 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 FAM213AQ9BRX8 229 aa16.94■□□□□ 0.3
ITGB1-204ENST00000417122 TIMM13Q9Y5L4 95 aaPredicted RBP16.94■□□□□ 0.3
ITGB1-204ENST00000417122 DOCK6Q96HP0 2047 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 PIRO00625 290 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 IL18RAPO95256 599 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 POU2F2P09086 479 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 ATF2P15336 505 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 FSHRP23945 695 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 LILRA4P59901 499 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 KRT85P78386 507 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 YWHAHQ04917 246 aaPredicted RBP16.93■□□□□ 0.3
ITGB1-204ENST00000417122 TPGS2Q68CL5 300 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 GLIS3Q8NEA6 775 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 ZSWIM2Q8NEG5 633 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 ASIC4Q96FT7 647 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 PYM1Q9BRP8 204 aaKnown RBP16.93■□□□□ 0.3
ITGB1-204ENST00000417122 SMOC2Q9H3U7 446 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 PCIF1Q9H4Z3 704 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 KCNK12Q9HB15 430 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■□□□ 13.9
ITGB1-204ENST00000417122 EPS15L1Q9UBC2 864 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 KCNH3Q9ULD8 1083 aa16.93■□□□□ 0.3
ITGB1-204ENST00000417122 ANO9A1A5B4 782 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 OAZ2O95190 189 aa16.92■□□□□ 0.3
ITGB1-204ENST00000417122 PAX3P23760 479 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms