RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 TFIP11Q9UBB9 837 aaKnown RBP19.45■□□□□ 0.7
CPNE1-210ENST00000416778 CDH7Q9ULB5 785 aa19.45■□□□□ 0.7
CPNE1-210ENST00000416778 UBQLN1Q9UMX0 589 aaKnown RBP19.45■□□□□ 0.7
CPNE1-210ENST00000416778 PCDHB8Q9UN66 801 aa19.45■□□□□ 0.7
CPNE1-210ENST00000416778 POLIQ9UNA4 740 aa19.45■□□□□ 0.7
CPNE1-210ENST00000416778 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.45■□□□□ 0.7
CPNE1-210ENST00000416778 MYH11P35749 1972 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 DOCK6Q96HP0 2047 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 A0A087X0B3 334 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 ARHGEF37A1IGU5 675 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 TISP43B9A030 160 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 PPP1R37O75864 691 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 OAZ2O95190 189 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 SEC24AO95486 1093 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 MCM4P33991 863 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 CLCN5P51795 746 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 PPP2R3AQ06190 1150 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 HTR4Q13639 388 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 SPATA1Q5VX52 437 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 ASTLQ6HA08 431 aaPredicted RBP19.44■□□□□ 0.7
CPNE1-210ENST00000416778 SLFN12LQ6IEE8 588 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 ALYREFQ86V81 257 aaKnown RBP19.44■□□□□ 0.7
CPNE1-210ENST00000416778 SFR1Q86XK3 245 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 TCEAL8Q8IYN2 117 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 TMEM105Q8N8V8 129 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 LINC00301Q8NCQ3 95 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 FGF13Q92913 245 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 RPP25Q9BUL9 199 aaKnown RBP19.44■□□□□ 0.7
CPNE1-210ENST00000416778 IKZF4Q9H2S9 585 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 WNT16Q9UBV4 365 aa19.44■□□□□ 0.7
CPNE1-210ENST00000416778 ADSSP30520 456 aa19.43■□□□□ 0.7
CPNE1-210ENST00000416778 TXLNAP40222 546 aa19.43■□□□□ 0.7
CPNE1-210ENST00000416778 AARSP49588 968 aaKnown RBP eCLIP19.43■□□□□ 0.7
CPNE1-210ENST00000416778 ACOT2P49753 483 aa19.43■□□□□ 0.7
CPNE1-210ENST00000416778 GUCY2FP51841 1108 aa19.43■□□□□ 0.7
CPNE1-210ENST00000416778 PTPN5P54829 565 aa19.43■□□□□ 0.7
CPNE1-210ENST00000416778 ARPP19P56211 112 aa19.43■□□□□ 0.7
CPNE1-210ENST00000416778 CTXN3Q4LDR2 81 aa19.43■□□□□ 0.7
CPNE1-210ENST00000416778 TPGS2Q68CL5 300 aa19.43■□□□□ 0.7
CPNE1-210ENST00000416778 ADALQ6DHV7 355 aa19.43■□□□□ 0.7
CPNE1-210ENST00000416778 CCDC73Q6ZRK6 1079 aa19.43■□□□□ 0.7
CPNE1-210ENST00000416778 ST13P5Q8NFI4 369 aaPredicted RBP19.43■□□□□ 0.7
CPNE1-210ENST00000416778 SEL1LQ9UBV2 794 aa19.43■□□□□ 0.7
CPNE1-210ENST00000416778 GAP43P17677 238 aa19.42■□□□□ 0.7
CPNE1-210ENST00000416778 ELF1P32519 619 aa19.42■□□□□ 0.7
CPNE1-210ENST00000416778 POU5F1Q01860 360 aaKnown RBP19.42■□□□□ 0.7
CPNE1-210ENST00000416778 KCNA1Q09470 495 aa19.42■□□□□ 0.7
CPNE1-210ENST00000416778 JADE1Q6IE81 842 aa19.42■□□□□ 0.7
CPNE1-210ENST00000416778 POTEHQ6S545 545 aa19.42■□□□□ 0.7
CPNE1-210ENST00000416778 PARM1Q6UWI2 310 aa19.42■□□□□ 0.7
CPNE1-210ENST00000416778 CRELD2Q6UXH1 353 aaPredicted RBP19.42■□□□□ 0.7
CPNE1-210ENST00000416778 FAM212AQ96EL1 285 aa19.42■□□□□ 0.7
CPNE1-210ENST00000416778 AVENQ9NQS1 362 aaPredicted RBP19.42■□□□□ 0.7
CPNE1-210ENST00000416778 AGO2Q9UKV8 859 aaKnown RBP19.42■□□□□ 0.7
CPNE1-210ENST00000416778 KCNH3Q9ULD8 1083 aa19.42■□□□□ 0.7
CPNE1-210ENST00000416778 MAFFQ9ULX9 164 aa19.42■□□□□ 0.7
CPNE1-210ENST00000416778 TIMM13Q9Y5L4 95 aaPredicted RBP19.42■□□□□ 0.7
CPNE1-210ENST00000416778 NUMBLQ9Y6R0 609 aa19.42■□□□□ 0.7
CPNE1-210ENST00000416778 CITO14578 2027 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 DOCK8Q8NF50 2099 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 PIRO00625 290 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 PPEF2O14830 753 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 XPOTO43592 962 aaKnown RBP19.41■□□□□ 0.7
CPNE1-210ENST00000416778 PI15O43692 258 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 CFHP08603 1231 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 SRFP11831 508 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 PTPN2P17706 415 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 LILRA4P59901 499 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 PABPC1LQ4VXU2 614 aaKnown RBP19.41■□□□□ 0.7
CPNE1-210ENST00000416778 SIX5Q8N196 739 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 FGF14Q92915 247 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 HVCN1Q96D96 273 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 PHOX2BQ99453 314 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 MFSD1Q9H3U5 465 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 ASB7Q9H672 318 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 MRPL44Q9H9J2 332 aaKnown RBP19.41■□□□□ 0.7
CPNE1-210ENST00000416778 CYP4F11Q9HBI6 524 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 TBC1D7Q9P0N9 293 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 FBXL21Q9UKT6 434 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 DERAQ9Y315 318 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 CACNA1HO95180 2353 aa19.41■□□□□ 0.7
CPNE1-210ENST00000416778 ANO9A1A5B4 782 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 FRMD3A2A2Y4 597 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 KRBA1A5PL33 1030 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 PRRG1O14668 218 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 SPTLC1O15269 473 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 SPTLC2O15270 562 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 GALR2O43603 387 aaPredicted RBP19.4■□□□□ 0.7
CPNE1-210ENST00000416778 PPP6R2O75170 966 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 RHOP08100 348 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 POSTNQ15063 836 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 STK38Q15208 465 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 C9orf57Q5W0N0 161 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 ZNF280DQ6N043 979 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 RNF19BQ6ZMZ0 732 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 FLCNQ8NFG4 579 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 BEST2Q8NFU1 509 aa19.4■□□□□ 0.7
CPNE1-210ENST00000416778 ZNF396Q96N95 335 aaPredicted RBP19.4■□□□□ 0.7
CPNE1-210ENST00000416778 AFF4Q9UHB7 1163 aaKnown RBP19.4■□□□□ 0.7
CPNE1-210ENST00000416778 PCDHB13Q9Y5F0 798 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms