RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 TMEM119Q4V9L6 283 aa15.74■□□□□ 0.11
PAF1-202ENST00000416728 IQCEQ6IPM2 695 aa15.74■□□□□ 0.11
PAF1-202ENST00000416728 PDZD4Q76G19 769 aaPredicted RBP15.74■□□□□ 0.11
PAF1-202ENST00000416728 DDX12PQ92771 950 aa15.74■□□□□ 0.11
PAF1-202ENST00000416728 AK8Q96MA6 479 aa15.74■□□□□ 0.11
PAF1-202ENST00000416728 OSBPL6Q9BZF3 934 aa15.74■□□□□ 0.11
PAF1-202ENST00000416728 SPATA6Q9NWH7 488 aaPredicted RBP15.74■□□□□ 0.11
PAF1-202ENST00000416728 AFF4Q9UHB7 1163 aaKnown RBP15.74■□□□□ 0.11
PAF1-202ENST00000416728 PCDHB8Q9UN66 801 aa15.74■□□□□ 0.11
PAF1-202ENST00000416728 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.74■□□□□ 0.11
PAF1-202ENST00000416728 DOCK6Q96HP0 2047 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 NPHP3-ACAD11A0A0J9YXS1 232 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 CD72P21854 359 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 LIG4P49917 911 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 NCKAP1LP55160 1127 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 FOXK2Q01167 660 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 YWHAHQ04917 246 aaPredicted RBP15.73■□□□□ 0.11
PAF1-202ENST00000416728 SPAG1Q07617 926 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 PRSS36Q5K4E3 855 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 CYP4A22Q5TCH4 519 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 TANGO2Q6ICL3 276 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 TPRG1Q6ZUI0 275 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 HAUS6Q7Z4H7 955 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 ELSPBP1Q96BH3 223 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 TCEAL4Q96EI5 215 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 KIF12Q96FN5 646 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 PLA2G2FQ9BZM2 168 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 LTB4R2Q9NPC1 389 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 ODF2LQ9ULJ1 636 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 MAFFQ9ULX9 164 aa15.73■□□□□ 0.11
PAF1-202ENST00000416728 MTF2Q9Y483 593 aaPredicted RBP15.73■□□□□ 0.11
PAF1-202ENST00000416728 TTC26A0AVF1 554 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 HNRNPDLO14979 420 aaKnown RBP15.72■□□□□ 0.11
PAF1-202ENST00000416728 LAMTOR5O43504 91 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 SLC26A4O43511 780 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 MICAL2O94851 1124 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 LRPAP1P30533 357 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 MAGEA9P43362 315 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 PPP2R3AQ06190 1150 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 TWF1Q12792 350 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 KYAT1Q16773 422 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 ARSHQ5FYA8 562 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 ZBTB41Q5SVQ8 909 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 POTEHQ6S545 545 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 GPBP1Q86WP2 473 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 CALML4Q96GE6 196 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 ZNF512Q96ME7 567 aaPredicted RBP15.72■□□□□ 0.11
PAF1-202ENST00000416728 NELL2Q99435 816 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 HAPLN2Q9GZV7 340 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 ZFP14Q9HCL3 533 aa15.72■□□□□ 0.11
PAF1-202ENST00000416728 UBQLN1Q9UMX0 589 aaKnown RBP15.72■□□□□ 0.11
PAF1-202ENST00000416728 MYH15Q9Y2K3 1946 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 M0QZQ0 153 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 NCAM2O15394 837 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 XPOTO43592 962 aaKnown RBP15.71■□□□□ 0.11
PAF1-202ENST00000416728 CYP3A5P20815 502 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 SCP2P22307 547 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 FCARP24071 287 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 UBA7P41226 1012 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 TNFSF9P41273 254 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 CCR2P41597 374 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 ID4P47928 161 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 DHX8Q14562 1220 aaKnown RBP15.71■□□□□ 0.11
PAF1-202ENST00000416728 FAM78AQ5JUQ0 283 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 ZNF852Q6ZMS4 543 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 RNF19BQ6ZMZ0 732 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 USP37Q86T82 979 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 MAML2Q8IZL2 1156 aaPredicted RBP15.71■□□□□ 0.11
PAF1-202ENST00000416728 LEMD2Q8NC56 503 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 DNASE1L2Q92874 299 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 KCNN1Q92952 543 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 HINFPQ9BQA5 517 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 REEP2Q9BRK0 252 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 OXCT2Q9BYC2 517 aaPredicted RBP15.71■□□□□ 0.11
PAF1-202ENST00000416728 ASAH2Q9NR71 780 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 HEBP1Q9NRV9 189 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 CEP72Q9P209 647 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 FBXO4Q9UKT5 387 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 SMC3Q9UQE7 1217 aa15.71■□□□□ 0.11
PAF1-202ENST00000416728 MRPS17Q9Y2R5 130 aaKnown RBP15.71■□□□□ 0.11
PAF1-202ENST00000416728 TIMM13Q9Y5L4 95 aaPredicted RBP15.71■□□□□ 0.11
PAF1-202ENST00000416728 VPS13AQ96RL7 3174 aa15.71■□□□□ 0.1
PAF1-202ENST00000416728 DMDP11532 3685 aa15.71■□□□□ 0.1
PAF1-202ENST00000416728 GVINP1Q7Z2Y8 2422 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 K7ENM7 598 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 KINO60870 393 aaKnown RBP15.7■□□□□ 0.1
PAF1-202ENST00000416728 FAM13AO94988 1023 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 OAZ2O95190 189 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 CD2BP2O95400 341 aaKnown RBP15.7■□□□□ 0.1
PAF1-202ENST00000416728 MYL4P12829 197 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 TARSP26639 723 aaKnown RBP15.7■□□□□ 0.1
PAF1-202ENST00000416728 MCM2P49736 904 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 GRM2Q14416 872 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 ZBTB6Q15916 424 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 ZNF528Q3MIS6 628 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 HS6ST3Q8IZP7 471 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 TMEM130Q8N3G9 435 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 MYCT1Q8N699 235 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 RASSF8Q8NHQ8 419 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 ASB16Q96NS5 453 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms