RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 NT5DC1Q5TFE4 455 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 ZNF280DQ6N043 979 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 YAF2Q8IY57 180 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 CEP120Q8N960 986 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 LEMD2Q8NC56 503 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 NETO1Q8TDF5 533 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 CSGALNACT1Q8TDX6 532 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 SMARCD2Q92925 531 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 GTF3C6Q969F1 213 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 TCEAL4Q96EI5 215 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 TCHPQ9BT92 498 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 MRPL4Q9BYD3 311 aaKnown RBP10.99□□□□□ -0.65
MDC1-202ENST00000416571 SLITRK6Q9H5Y7 841 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 POLD4Q9HCU8 107 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 ZNF334Q9HCZ1 680 aaPredicted RBP10.99□□□□□ -0.65
MDC1-202ENST00000416571 PARD6AQ9NPB6 346 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 ASAH2Q9NR71 780 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 FBXL5Q9UKA1 691 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 PHLPP2Q6ZVD8 1323 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 PDCD11Q14690 1871 aaKnown RBP10.99□□□□□ -0.65
MDC1-202ENST00000416571 CITO14578 2027 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 MAST4O15021 2626 aa10.99□□□□□ -0.65
MDC1-202ENST00000416571 SPTBN2O15020 2390 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 COL4A2P08572 1712 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.98□□□□□ -0.65
MDC1-202ENST00000416571 LRP3O75074 770 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 RETP07949 1114 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 MUTP22033 750 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 RPL9P32969 192 aaKnown RBP10.98□□□□□ -0.65
MDC1-202ENST00000416571 CXCL12P48061 93 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 TWF1Q12792 350 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 ORC2Q13416 577 aaPredicted RBP10.98□□□□□ -0.65
MDC1-202ENST00000416571 SIM2Q14190 667 aaPredicted RBP10.98□□□□□ -0.65
MDC1-202ENST00000416571 LRRC32Q14392 662 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 ME3Q16798 604 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 C1orf228Q6PIY5 440 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 CD300LGQ6UXG3 332 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 VITQ6UXI7 678 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 MAMSTRQ6ZN01 415 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.98□□□□□ -0.65
MDC1-202ENST00000416571 MAP4K3Q8IVH8 894 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 NSUN7Q8NE18 718 aaKnown RBP10.98□□□□□ -0.65
MDC1-202ENST00000416571 APPL2Q8NEU8 664 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 ZSCAN18Q8TBC5 510 aaPredicted RBP10.98□□□□□ -0.65
MDC1-202ENST00000416571 FAM200AQ8TCP9 573 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 E2F7Q96AV8 911 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 ACAP3Q96P50 834 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 CDT1Q9H211 546 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 BHMT2Q9H2M3 363 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 TRPV5Q9NQA5 729 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 MAFFQ9ULX9 164 aa10.98□□□□□ -0.65
MDC1-202ENST00000416571 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.98□□□□□ -0.65
MDC1-202ENST00000416571 SHISA7A6NL88 538 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 JAK2O60674 1132 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 SEC24AO95486 1093 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 ADRB1P08588 477 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 HARSP12081 509 aaKnown RBP10.97□□□□□ -0.65
MDC1-202ENST00000416571 TDGF1P13385 188 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 TGM1P22735 817 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 CCNE1P24864 410 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 MARCKSP29966 332 aaPredicted RBP10.97□□□□□ -0.65
MDC1-202ENST00000416571 VIPR2P41587 438 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 CCR2P41597 374 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 KPNA1P52294 538 aaPredicted RBP10.97□□□□□ -0.65
MDC1-202ENST00000416571 PEX3P56589 373 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 ANAPC15P60006 121 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 SATB1Q01826 763 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 DMP1Q13316 513 aaPredicted RBP10.97□□□□□ -0.65
MDC1-202ENST00000416571 GNL2Q13823 731 aaKnown RBP10.97□□□□□ -0.65
MDC1-202ENST00000416571 ZNF174Q15697 407 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 XKR4Q5GH76 650 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 PPM1JQ5JR12 505 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 POTEHQ6S545 545 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 MFSD6LQ8IWD5 586 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 HS6ST3Q8IZP7 471 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 MSANTD3Q96H12 275 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 CHAMP1Q96JM3 812 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 ACO2Q99798 780 aaKnown RBP10.97□□□□□ -0.65
MDC1-202ENST00000416571 GPR88Q9GZN0 384 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 AFF4Q9UHB7 1163 aaKnown RBP10.97□□□□□ -0.65
MDC1-202ENST00000416571 RALGAPA1Q6GYQ0 2036 aa10.97□□□□□ -0.65
MDC1-202ENST00000416571 SLC30A4O14863 429 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 FOXD2O60548 495 aaPredicted RBP10.96□□□□□ -0.65
MDC1-202ENST00000416571 LARGE1O95461 756 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 MCF2P10911 925 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 KCNE1P15382 129 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 GJA1P17302 382 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 CNR2P34972 360 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 MLLT6P55198 1093 aaPredicted RBP10.96□□□□□ -0.65
MDC1-202ENST00000416571 GUCY1B3Q02153 619 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 PLD1Q13393 1074 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 MRPL58Q14197 206 aaKnown RBP10.96□□□□□ -0.65
MDC1-202ENST00000416571 TEAD2Q15562 447 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 ALKAL1Q6UXT8 129 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 PRR23CQ6ZRP0 262 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 ZNF687Q8N1G0 1237 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 SPEM1Q8N4L4 309 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 DDX12PQ92771 950 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 SUSD3Q96L08 255 aa10.96□□□□□ -0.65
MDC1-202ENST00000416571 ZSWIM3Q96MP5 696 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms