RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 BEAN1Q3B7T3 259 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 DALRD3Q5D0E6 543 aaKnown RBP3.37□□□□□ -1.87
LINC00428-201ENST00000415620 DOK3Q7L591 496 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 FAM83AQ86UY5 434 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 ZNF366Q8N895 744 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 GLB1L3Q8NCI6 653 aaPredicted RBP3.37□□□□□ -1.87
LINC00428-201ENST00000415620 ANKS1AQ92625 1134 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 RPGRQ92834 1020 aaKnown RBP3.37□□□□□ -1.87
LINC00428-201ENST00000415620 P2RX7Q99572 595 aaKnown RBP3.37□□□□□ -1.87
LINC00428-201ENST00000415620 MRPL4Q9BYD3 311 aaKnown RBP3.37□□□□□ -1.87
LINC00428-201ENST00000415620 TAF1DQ9H5J8 278 aaPredicted RBP3.37□□□□□ -1.87
LINC00428-201ENST00000415620 TRIM39Q9HCM9 518 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 AKIP1Q9NQ31 210 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 TRPM5Q9NZQ8 1165 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 STK26Q9P289 416 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 TLK1Q9UKI8 766 aa3.37□□□□□ -1.87
LINC00428-201ENST00000415620 SETXQ7Z333 2677 aaKnown RBP3.37□□□□□ -1.87
LINC00428-201ENST00000415620 PPIP5K1Q6PFW1 1433 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 POLR2AP24928 1970 aaKnown RBP3.36□□□□□ -1.87
LINC00428-201ENST00000415620 COL3A1P02461 1466 aaPredicted RBP3.36□□□□□ -1.87
LINC00428-201ENST00000415620 CACNA1GO43497 2377 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 PIPSLA2A3N6 862 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 NRP1O14786 923 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 DNAJC6O75061 913 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 ZFPL1O95159 310 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 NDUFA10O95299 355 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 CYP17A1P05093 508 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 MMP10P09238 476 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 HOXB6P17509 224 aaKnown RBP3.36□□□□□ -1.87
LINC00428-201ENST00000415620 EN2P19622 333 aaPredicted RBP3.36□□□□□ -1.87
LINC00428-201ENST00000415620 APOBEC3AP31941 199 aaPredicted RBP3.36□□□□□ -1.87
LINC00428-201ENST00000415620 WNT3AP56704 352 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 KRTAP10-6P60371 365 aaPredicted RBP3.36□□□□□ -1.87
LINC00428-201ENST00000415620 MRPL49Q13405 166 aaKnown RBP3.36□□□□□ -1.87
LINC00428-201ENST00000415620 KCTD2Q14681 263 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 MAN2A1Q16706 1144 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 PRAMEF9Q5VWM5 478 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 CST9Q5W186 159 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 GDF7Q7Z4P5 450 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 NME9Q86XW9 330 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 UNC5BQ8IZJ1 945 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 CNTROBQ8N137 903 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 EPC1Q9H2F5 836 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 DDX21Q9NR30 783 aaKnown RBP eCLIP3.36□□□□□ -1.87
LINC00428-201ENST00000415620 MTMR10Q9NXD2 777 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 ING3Q9NXR8 418 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 SYNPO2Q9UMS6 1093 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 PIEZO1Q92508 2521 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 MON2Q7Z3U7 1717 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 ANKARQ7Z5J8 1434 aa3.36□□□□□ -1.87
LINC00428-201ENST00000415620 AFDNP55196 1824 aaKnown RBP3.35□□□□□ -1.87
LINC00428-201ENST00000415620 WDFY4Q6ZS81 3184 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 CFAP54Q96N23 3096 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 MARCH11A6NNE9 402 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 OPHN1O60890 802 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 NCR1O76036 304 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 FSBPO95073 299 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 IGLV2-14P01704 120 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 ZSCAN20P17040 1043 aaPredicted RBP3.35□□□□□ -1.87
LINC00428-201ENST00000415620 CHRNA5P30532 468 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 GUCY1B3Q02153 619 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 NHLH1Q02575 133 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 RASA3Q14644 834 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 ABHD17BQ5VST6 288 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 BTNL9Q6UXG8 535 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 CKAP2LQ8IYA6 745 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 CHST14Q8NCH0 376 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 PIK3C3Q8NEB9 887 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 ZNF384Q8TF68 577 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 UIMC1Q96RL1 719 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 TUBGCP5Q96RT8 1024 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 DUSP26Q9BV47 211 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 MTG2Q9H4K7 406 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 HDAC5Q9UQL6 1122 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 WDR17Q8IZU2 1322 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 LAMB2P55268 1798 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 MAP2P11137 1827 aaKnown RBP3.35□□□□□ -1.87
LINC00428-201ENST00000415620 C5orf42Q9H799 3197 aa3.35□□□□□ -1.87
LINC00428-201ENST00000415620 BCORQ6W2J9 1755 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 CCDC163A0A0D9SF12 145 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 DIRC3C9JPN6 131 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 M0R2C6 588 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 LEFTY2O00292 366 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 RBMXL2O75526 392 aaKnown RBP3.34□□□□□ -1.87
LINC00428-201ENST00000415620 ESRRBO95718 433 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 PTX3P26022 381 aaPredicted RBP3.34□□□□□ -1.87
LINC00428-201ENST00000415620 ADCY2Q08462 1091 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 MPP3Q13368 585 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 CREB3L3Q68CJ9 461 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 KIAA1841Q6NSI8 718 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 ESRP1Q6NXG1 681 aaKnown RBP3.34□□□□□ -1.87
LINC00428-201ENST00000415620 PLXDC1Q8IUK5 500 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 SYT12Q8IV01 421 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 Q8N9P0 234 aaPredicted RBP3.34□□□□□ -1.87
LINC00428-201ENST00000415620 ADAM2Q99965 735 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 C1QTNF7Q9BXJ2 289 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 KIAA1586Q9HCI6 787 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 SIRPGQ9P1W8 387 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 ITGB4P16144 1822 aa3.34□□□□□ -1.87
LINC00428-201ENST00000415620 BDP1A6H8Y1 2624 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms