RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 MCRS1Q96EZ8 462 aa13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 INTS4Q96HW7 963 aaKnown RBP13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 ZSWIM3Q96MP5 696 aa13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 KXD1Q9BQD3 176 aa13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 TCHPQ9BT92 498 aa13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 TIPINQ9BVW5 301 aa13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 LRRC3Q9BY71 257 aa13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 IKZF4Q9H2S9 585 aa13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 CEP72Q9P209 647 aa13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 KCNH3Q9ULD8 1083 aa13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 POLIQ9UNA4 740 aa13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 SIT1Q9Y3P8 196 aa13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 GVINP1Q7Z2Y8 2422 aa13.58□□□□□ -0.24
NCKIPSD-203ENST00000415281 VPS37CA5D8V6 355 aaPredicted RBP13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 M0QZQ0 153 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 SYN3O14994 580 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 TRAPPC3O43617 180 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 CXCL8P10145 99 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 HARSP12081 509 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 PTPN2P17706 415 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 CD72P21854 359 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 LRPAP1P30533 357 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 AARSP49588 968 aaKnown RBP eCLIP13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 GUCY2FP51841 1108 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 ZNF131P52739 623 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 YARSP54577 528 aaKnown RBP13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 SLC44A4Q53GD3 710 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 SPECC1Q5M775 1068 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 RNF19BQ6ZMZ0 732 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 USP49Q70CQ1 688 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 HAUS6Q7Z4H7 955 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 KCTD17Q8N5Z5 321 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 BEST2Q8NFU1 509 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 PJA1Q8NG27 643 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 REEP2Q9BRK0 252 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 TOPORSQ9NS56 1045 aaPredicted RBP13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 SLC38A7Q9NVC3 462 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 TSC2P49815 1807 aa13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 PTPRZ1P23471 2315 aaPredicted RBP13.57□□□□□ -0.24
NCKIPSD-203ENST00000415281 SCN1AP35498 2009 aa13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 LACTBL1A8MY62 500 aa13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 ANKRD63C9JTQ0 380 aa13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 SPTLC1O15269 473 aa13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 XYLBO75191 536 aa13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 PIGRP01833 764 aa13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 SP9P0CG40 484 aa13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 MCM6Q14566 821 aa13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 NOLC1Q14978 699 aaKnown RBP eCLIP13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 ENOX2Q16206 610 aaKnown RBP13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 SCARA3Q6AZY7 606 aa13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 NKD2Q969F2 451 aaPredicted RBP13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 ANKFY1Q9P2R3 1169 aa13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 PCDHB8Q9UN66 801 aa13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 MRPS23Q9Y3D9 190 aaKnown RBP13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 TIMM13Q9Y5L4 95 aaPredicted RBP13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 R4GN57 208 aa13.56□□□□□ -0.24
NCKIPSD-203ENST00000415281 KANSL1LA0AUZ9 987 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 TISP43B9A030 160 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 STK25O00506 426 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 CLDN3O15551 220 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 ECI2O75521 394 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 OAZ2O95190 189 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 OR4Q2P0C623 313 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 PDCP20941 246 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 SYT1P21579 422 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 EPHA5P54756 1037 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 ARPP19P56211 112 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 PTPAQ15257 358 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 FAM78AQ5JUQ0 283 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 RSPRY1Q96DX4 576 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 PLEKHA5Q9HAU0 1116 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 CYP4F11Q9HBI6 524 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 KCND2Q9NZV8 630 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 TBX20Q9UMR3 447 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 INSL5Q9Y5Q6 135 aa13.55□□□□□ -0.24
NCKIPSD-203ENST00000415281 TICRRQ7Z2Z1 1910 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 A0A0B4J269 797 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 MICAL2O94851 1124 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 CLTAP09496 248 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 GJA1P17302 382 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 PLCG1P19174 1290 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 NMT1P30419 496 aaKnown RBP13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 GTF2BQ00403 316 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 STRN3Q13033 797 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 KARSQ15046 597 aaKnown RBP13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 MLF2Q15773 248 aaPredicted RBP13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 CTXN3Q4LDR2 81 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 TPGS2Q68CL5 300 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 MTSS1LQ765P7 747 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 APBB1IPQ7Z5R6 666 aaPredicted RBP13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 C1orf210Q8IVY1 113 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 ADSSL1Q8N142 457 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 RAD54LQ92698 747 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 CLDN23Q96B33 292 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 ELSPBP1Q96BH3 223 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 AK8Q96MA6 479 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 TMEM209Q96SK2 561 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 CORO1BQ9BR76 489 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 STRA6Q9BX79 667 aa13.54□□□□□ -0.24
NCKIPSD-203ENST00000415281 DNAJC25Q9H1X3 360 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms