RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 NKX1-2Q9UD57 310 aaPredicted RBP10.41□□□□□ -0.74
CD44-206ENST00000415148 KCNG1Q9UIX4 513 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 MROH7Q68CQ1 1323 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 WDR64B1ANS9 1081 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 CYP1A1P04798 512 aaPredicted RBP10.41□□□□□ -0.74
CD44-206ENST00000415148 BRAFP15056 766 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 FOXN2P32314 431 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 SKIV2L2P42285 1042 aaKnown RBP10.41□□□□□ -0.74
CD44-206ENST00000415148 VPS41P49754 854 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 RTP1P59025 263 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 CLDN10P78369 228 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 CCDC15Q0P6D6 951 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 STRN3Q13033 797 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 SPP2Q13103 211 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 BRDTQ58F21 947 aaPredicted RBP10.41□□□□□ -0.74
CD44-206ENST00000415148 FAM102BQ5T8I3 360 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 RNF43Q68DV7 783 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 NAIF1Q69YI7 327 aaPredicted RBP10.41□□□□□ -0.74
CD44-206ENST00000415148 TRIM72Q6ZMU5 477 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 C15orf39Q6ZRI6 1047 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 SPATA21Q7Z572 469 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 ANKRD35Q8N283 1001 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 GPD1LQ8N335 351 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 CNKSR1Q969H4 720 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 AKT1S1Q96B36 256 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 SENP7Q9BQF6 1050 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 KMT5AQ9NQR1 393 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 NINJ2Q9NZG7 142 aa10.41□□□□□ -0.74
CD44-206ENST00000415148 DENND3A2RUS2 1198 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 H0YCG3 227 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 DKC1O60832 514 aaKnown RBP eCLIP10.4□□□□□ -0.74
CD44-206ENST00000415148 PROSCO94903 275 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 KRT5P13647 590 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 ABL2P42684 1182 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 SLC18A1P54219 525 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 MAP3K10Q02779 954 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 C2CD6Q53TS8 623 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 TMEM63BQ5T3F8 832 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 LIN9Q5TKA1 542 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 ASRGL1Q7L266 308 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 MYPNQ86TC9 1320 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 RHOT1Q8IXI2 618 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 KATNAL2Q8IYT4 538 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 OGFOD1Q8N543 542 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 IL31RAQ8NI17 732 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 KLHL29Q96CT2 875 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 MRPL47Q9HD33 250 aaKnown RBP10.4□□□□□ -0.74
CD44-206ENST00000415148 UBN1Q9NPG3 1134 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 GPRC5CQ9NQ84 441 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 FBXO28Q9NVF7 368 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 NKIRAS1Q9NYS0 192 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 PKD2L1Q9P0L9 805 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 R3HDM2Q9Y2K5 976 aaKnown RBP10.4□□□□□ -0.74
CD44-206ENST00000415148 PSME4Q14997 1843 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 CNTNAP1P78357 1384 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 NDC80O14777 642 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 STX2P32856 288 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 CETN2P41208 172 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 UGCGQ16739 394 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 XRRA1Q6P2D8 792 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 FAM47EQ6ZV65 393 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 ZNF365Q70YC5 407 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 ECHDC2Q86YB7 292 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 MAB21L3Q8N8X9 362 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 EXD1Q8NHP7 514 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.4□□□□□ -0.74
CD44-206ENST00000415148 SYTL5Q8TDW5 730 aaPredicted RBP10.4□□□□□ -0.74
CD44-206ENST00000415148 POMGNT1Q8WZA1 660 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 SAAL1Q96ER3 474 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 ADAM33Q9BZ11 813 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 ARHGEF3Q9NR81 526 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 C1orf112Q9NSG2 853 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 SLC5A4Q9NY91 659 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 EURLQ9NYK6 297 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 TCEAL9Q9UHQ7 104 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 NAALADL1Q9UQQ1 740 aa10.4□□□□□ -0.74
CD44-206ENST00000415148 EME2A4GXA9 379 aaPredicted RBP10.39□□□□□ -0.75
CD44-206ENST00000415148 NFIBO00712 420 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 WDR46O15213 610 aaKnown RBP10.39□□□□□ -0.75
CD44-206ENST00000415148 MAGEB2O15479 319 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 ASNSP08243 561 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 CCND1P24385 295 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 NSFP46459 744 aaKnown RBP10.39□□□□□ -0.75
CD44-206ENST00000415148 PGM5Q15124 567 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 MTFR1Q15390 333 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 DLGAP5Q15398 846 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 SPDYE2Q495Y8 402 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 WDR44Q5JSH3 913 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 SLC39A4Q6P5W5 647 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 ANKS1BQ7Z6G8 1248 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 FAM83AQ86UY5 434 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 TDRPQ86YL5 185 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 TGS1Q96RS0 853 aaKnown RBP10.39□□□□□ -0.75
CD44-206ENST00000415148 FAM167BQ9BTA0 163 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 PPCSQ9HAB8 311 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 KLHL14Q9P2G3 628 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 ZMYND8Q9ULU4 1186 aaPredicted RBP10.39□□□□□ -0.75
CD44-206ENST00000415148 YDJCA8MPS7 323 aa10.39□□□□□ -0.75
CD44-206ENST00000415148 MAFGO15525 162 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms