RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 PTGESO14684 152 aa18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 STRN3Q13033 797 aa18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 KREMEN2Q8NCW0 462 aa18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 MRFAP1L1Q96HT8 127 aa18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 UROC1Q96N76 676 aa18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 ACO2Q99798 780 aaKnown RBP18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 NTPCRQ9BSD7 190 aaKnown RBP18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 TCHPQ9BT92 498 aa18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 HSD3B7Q9H2F3 369 aa18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 FANCLQ9NW38 375 aa18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 ARHGAP28Q9P2N2 729 aa18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 USP20Q9Y2K6 914 aa18.39■□□□□ 0.53
SCAMP4-204ENST00000414057 CCDC195A0A1B0GUA6 201 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 EDN1P05305 212 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 ZNF18P17022 549 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 GRM5P41594 1212 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 LRRC63Q05C16 580 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 SPAG1Q07617 926 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 ZNF568Q3ZCX4 644 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 FAM171A1Q5VUB5 890 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 CENPPQ6IPU0 288 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 STXBP4Q6ZWJ1 553 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 DAW1Q8N136 415 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 FBXL6Q8N531 539 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 MED15Q96RN5 788 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 TTPALQ9BTX7 342 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 SLC38A7Q9NVC3 462 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 ZDHHC7Q9NXF8 308 aa18.38■□□□□ 0.53
SCAMP4-204ENST00000414057 TDRD15B5MCY1 1934 aaKnown RBP18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 H0YCG3 227 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 CBFA2T2O43439 604 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 KIF4AO95239 1232 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 MAPTP10636 758 aaKnown RBP18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 PLS3P13797 630 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 CDC25BP30305 580 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 RAD51AP2Q09MP3 1159 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 CDKAL1Q5VV42 579 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 SFR1Q86XK3 245 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 CEP57Q86XR8 500 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 PALB2Q86YC2 1186 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 SPIRE2Q8WWL2 714 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 PIK3R5Q8WYR1 880 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 RABGGTAQ92696 567 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 B3GALT6Q96L58 329 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 PAAF1Q9BRP4 392 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 ZHX3Q9H4I2 956 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 PIDD1Q9HB75 910 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 LARSQ9P2J5 1176 aaKnown RBP18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 MAPK8IP1Q9UQF2 711 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 UBE4BO95155 1302 aa18.37■□□□□ 0.53
SCAMP4-204ENST00000414057 TMEM189-UBE2V1I3L0A0 370 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 EIF3DO15371 548 aaKnown RBP eCLIP18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 AP5Z1O43299 807 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 TGM5O43548 720 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 TRAPPC3O43617 180 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 FGFR1OPO95684 399 aaKnown RBP18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 TPM3P06753 285 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 MCF2P10911 925 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 CDK11BP21127 795 aaKnown RBP18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 ZNF75DP51815 510 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 STX17P56962 302 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 CACNB1Q02641 598 aaPredicted RBP18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 MAPK7Q13164 816 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 ALCAMQ13740 583 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 NAB2Q15742 525 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 BMT2Q1RMZ1 405 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 TTI2Q6NXR4 508 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 DCLRE1AQ6PJP8 1040 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 ANKRD20A12PQ8NF67 263 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 HASPINQ8TF76 798 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 TSG101Q99816 390 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 THAP9Q9H5L6 903 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 PTPRHQ9HD43 1115 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 LIMD1Q9UGP4 676 aa18.36■□□□□ 0.53
SCAMP4-204ENST00000414057 MYH11P35749 1972 aa18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 SFI1A8K8P3 1242 aa18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 B3GAT3O94766 335 aa18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 SCP2P22307 547 aa18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 RTP2Q5QGT7 225 aa18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 EPM2AIP1Q7L775 607 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 FAM114A1Q8IWE2 563 aa18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 MYCT1Q8N699 235 aa18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 SMG7Q92540 1137 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 ASIC4Q96FT7 647 aa18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 DDX27Q96GQ7 796 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 ACAP3Q96P50 834 aa18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 PPP1R10Q96QC0 940 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 TARS2Q9BW92 718 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 CDT1Q9H211 546 aa18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 MRPL44Q9H9J2 332 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 WDR6Q9NNW5 1121 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-204ENST00000414057 SLC16A4O15374 487 aa18.34■□□□□ 0.53
SCAMP4-204ENST00000414057 SERPINC1P01008 464 aa18.34■□□□□ 0.53
SCAMP4-204ENST00000414057 FANCCQ00597 558 aa18.34■□□□□ 0.53
SCAMP4-204ENST00000414057 PSMD5Q16401 504 aa18.34■□□□□ 0.53
SCAMP4-204ENST00000414057 GLRA4Q5JXX5 417 aa18.34■□□□□ 0.53
SCAMP4-204ENST00000414057 LIN9Q5TKA1 542 aa18.34■□□□□ 0.53
SCAMP4-204ENST00000414057 LILRA6Q6PI73 481 aa18.34■□□□□ 0.53
SCAMP4-204ENST00000414057 MPZL3Q6UWV2 235 aa18.34■□□□□ 0.53
SCAMP4-204ENST00000414057 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms