RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 KINO60870 393 aaKnown RBP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 ADH1BP00325 375 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 P4HBP07237 508 aaKnown RBP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 ARF4P18085 180 aaPredicted RBP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 FSHRP23945 695 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 AKAP5P24588 427 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 YWHABP31946 246 aaKnown RBP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 STARD6P59095 220 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 PTENP60484 403 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 GPC5P78333 572 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 MBTD1Q05BQ5 628 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 GRIK3Q13003 919 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 SNW1Q13573 536 aaKnown RBP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 CAPSQ13938 189 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 CTTNQ14247 550 aaKnown RBP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 MLF2Q15773 248 aaPredicted RBP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 USP41Q3LFD5 358 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 RILPL1Q5EBL4 403 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 XKR9Q5GH70 373 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 LILRA6Q6PI73 481 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 GRASPQ7Z6J2 395 aaPredicted RBP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 CDR2LQ86X02 465 aaPredicted RBP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 ERMNQ8TAM6 284 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 TCP11Q8WWU5 503 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 FOXJ1Q92949 421 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 CNTNAP3BQ96NU0 1288 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 PAAF1Q9BRP4 392 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 DDX23Q9BUQ8 820 aaKnown RBP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 COLEC11Q9BWP8 271 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 CNTNAP3Q9BZ76 1288 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 CSRNP2Q9H175 543 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 TMEM60Q9H2L4 133 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 UBN1Q9NPG3 1134 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 SPATA6Q9NWH7 488 aaPredicted RBP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 RGL1Q9NZL6 768 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 KLK14Q9P0G3 267 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 FNIP2Q9P278 1114 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 ADAM28Q9UKQ2 775 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 PCDHA12Q9UN75 941 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 PPME1Q9Y570 386 aa9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 KMT2BQ9UMN6 2715 aaPredicted RBP9.11□□□□□ -0.95
UPF3AP1-201ENST00000413731 SF3B1O75533 1304 aaKnown RBP eCLIP9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 CASTOR2A6NHX0 329 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 CCL16O15467 120 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 ADAM12O43184 909 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 KRT37O76014 449 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 KIF4AO95239 1232 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 NPTXRO95502 500 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 C8AP07357 584 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 AXLP30530 894 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 TAGLNQ01995 201 aaKnown RBP9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 SPIRE1Q08AE8 756 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 NAA30Q147X3 362 aaPredicted RBP9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 UBXN2BQ14CS0 331 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 LIN9Q5TKA1 542 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 BRAPQ7Z569 592 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 C4orf19Q8IY42 314 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 ITFG1Q8TB96 612 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 FGF13Q92913 245 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 DYDC2Q96IM9 177 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 KXD1Q9BQD3 176 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 TRIM6Q9C030 488 aaPredicted RBP9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 NCDNQ9UBB6 729 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 CDH7Q9ULB5 785 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 GIT1Q9Y2X7 761 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 PCDHB6Q9Y5E3 794 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 ZMYM2Q9UBW7 1377 aa9.1□□□□□ -0.95
UPF3AP1-201ENST00000413731 SPAG17Q6Q759 2223 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 KANSL1LA0AUZ9 987 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 ASAP2O43150 1006 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 LAMTOR5O43504 91 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 C1RP00736 705 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 SYT1P21579 422 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 CD72P21854 359 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 CREMQ03060 361 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 HSP90AA2PQ14568 343 aaPredicted RBP9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 PCBP1Q15365 356 aaKnown RBP eCLIP9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 EPHA7Q15375 998 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 PSMD5Q16401 504 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 PPM1LQ5SGD2 360 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 HAUS3Q68CZ6 603 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 TPH2Q8IWU9 490 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 NPAS3Q8IXF0 933 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 EXOC8Q8IYI6 725 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 GPR65Q8IYL9 337 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 HACE1Q8IYU2 909 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 ING5Q8WYH8 240 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 SHDQ96IW2 340 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 MTMR9Q96QG7 549 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 EIF2AK1Q9BQI3 630 aaKnown RBP9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 CLSTN3Q9BQT9 956 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 BCO2Q9BYV7 579 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 RAB34Q9BZG1 259 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 ZSWIM4Q9H7M6 989 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 LTB4R2Q9NPC1 389 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 HCFC1R1Q9NWW0 138 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 PARP2Q9UGN5 583 aa9.09□□□□□ -0.95
UPF3AP1-201ENST00000413731 POLIQ9UNA4 740 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms