RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 FNBP1Q96RU3 617 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 PCDHB18PQ96TA0 734 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 TARS2Q9BW92 718 aaKnown RBP13.88□□□□□ -0.19
LITAF-203ENST00000413364 TRIM4Q9C037 500 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 HAPLN2Q9GZV7 340 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 EPN3Q9H201 632 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 MMADHCQ9H3L0 296 aaPredicted RBP13.88□□□□□ -0.19
LITAF-203ENST00000413364 SUN2Q9UH99 717 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 TMEM59LQ9UK28 342 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 A0A0B4J269 797 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 LDHAP00338 332 aaKnown RBP13.88□□□□□ -0.19
LITAF-203ENST00000413364 TNFRSF8P28908 595 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 SLC7A5Q01650 507 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 GCNT1Q02742 428 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 XRCC4Q13426 336 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 PLPPR4Q7Z2D5 763 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 SLC47A2Q86VL8 602 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 AENQ8WTP8 325 aaKnown RBP13.88□□□□□ -0.19
LITAF-203ENST00000413364 GLG1Q92896 1179 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 ZBTB45Q96K62 511 aaPredicted RBP13.88□□□□□ -0.19
LITAF-203ENST00000413364 TRIM7Q9C029 511 aa13.88□□□□□ -0.19
LITAF-203ENST00000413364 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.88□□□□□ -0.19
LITAF-203ENST00000413364 CYP11B1P15538 503 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 ACOT2P49753 483 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 RNASE9P60153 205 aaKnown RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 ERVK-9P63128 1117 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 TNNC1P63316 161 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 GPC5P78333 572 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 MRPS25P82663 173 aaKnown RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 FMO1Q01740 532 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 PTPROQ16827 1216 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 HSDL1Q3SXM5 330 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 ZACNQ401N2 412 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 EAPPQ56P03 285 aaPredicted RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 IER5Q5VY09 327 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 NAA35Q5VZE5 725 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 CCDC62Q6P9F0 684 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 GSPT2Q8IYD1 628 aaKnown RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 ATP8B4Q8TF62 1192 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 PRPF31Q8WWY3 499 aaKnown RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 TAF1DQ9H5J8 278 aaPredicted RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 COG5Q9UP83 839 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 GLTPD2A6NH11 291 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 A6NHS1 94 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 PGRMC1O00264 195 aaKnown RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 NOP56O00567 594 aaKnown RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 GAS2O43903 313 aaKnown RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 C4BPAP04003 597 aaKnown RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 PDE6CP51160 858 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 EFNA5P52803 228 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 WNT7BP56706 349 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 CDR2Q01850 454 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 USP4Q13107 963 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 TMED1Q13445 227 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 BLMHQ13867 455 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 WDR78Q5VTH9 848 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 ZPBP2Q6X784 338 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 FBXO16Q8IX29 292 aaPredicted RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 EXOC8Q8IYI6 725 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 RASGEF1CQ8N431 466 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 SCFD2Q8WU76 684 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 GTF3C2Q8WUA4 911 aaPredicted RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.87□□□□□ -0.19
LITAF-203ENST00000413364 PI4K2AQ9BTU6 479 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 MSTO1Q9BUK6 570 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 C1orf112Q9NSG2 853 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 RBAKQ9NYW8 714 aaPredicted RBP13.87□□□□□ -0.19
LITAF-203ENST00000413364 ADGRA2Q96PE1 1338 aa13.87□□□□□ -0.19
LITAF-203ENST00000413364 AGPSO00116 658 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 HLA-DRAP01903 254 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 EDN1P05305 212 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 MMEP08473 750 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 TNNI1P19237 187 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 MARK3P27448 753 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 DEUP1Q05D60 604 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 DYNC1I2Q13409 638 aaKnown RBP13.86□□□□□ -0.19
LITAF-203ENST00000413364 WDR44Q5JSH3 913 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 C11orf63Q6NUN7 778 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 TRIM50Q86XT4 487 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 C17orf50Q8WW18 174 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 RIN2Q8WYP3 895 aaPredicted RBP13.86□□□□□ -0.19
LITAF-203ENST00000413364 DHX38Q92620 1227 aaKnown RBP13.86□□□□□ -0.19
LITAF-203ENST00000413364 SLC10A4Q96EP9 437 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 FAM84AQ96KN4 292 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 SPATA33Q96N06 139 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 KRT12Q99456 494 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 HINFPQ9BQA5 517 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 ACP6Q9NPH0 428 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 ANKFY1Q9P2R3 1169 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 PNMA3Q9UL41 463 aa13.86□□□□□ -0.19
LITAF-203ENST00000413364 DIS3Q9Y2L1 958 aaKnown RBP13.86□□□□□ -0.19
LITAF-203ENST00000413364 IGKV6-21A0A0C4DH24 114 aa13.85□□□□□ -0.19
LITAF-203ENST00000413364 ZBTB42B2RXF5 422 aa13.85□□□□□ -0.19
LITAF-203ENST00000413364 DDX3YO15523 660 aaKnown RBP13.85□□□□□ -0.19
LITAF-203ENST00000413364 TPD52L2O43399 206 aaKnown RBP13.85□□□□□ -0.19
LITAF-203ENST00000413364 SMIM24O75264 130 aa13.85□□□□□ -0.19
LITAF-203ENST00000413364 GNAT1P11488 350 aa13.85□□□□□ -0.19
LITAF-203ENST00000413364 ZBTB41Q5SVQ8 909 aa13.85□□□□□ -0.19
LITAF-203ENST00000413364 TDRD10Q5VZ19 366 aaKnown RBP13.85□□□□□ -0.19
LITAF-203ENST00000413364 LMBRD2Q68DH5 695 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms