RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 TMEM191BP0C7N4 346 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 DLATP10515 647 aaKnown RBP16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 TNNI1P19237 187 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 AARSP49588 968 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 AP3M2P53677 418 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 DSG1Q02413 1049 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 PTPN14Q15678 1187 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 CT47A1Q5JQC4 288 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 USP37Q86T82 979 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 FAM186BQ8IYM0 893 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 OR5B17Q8NGF7 314 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 PLEKHO2Q8TD55 490 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 PPP2R3CQ969Q6 453 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 BORCS6Q96GS4 357 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 ANKRD36BP1Q96IX9 119 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 SUSD3Q96L08 255 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 POP1Q99575 1024 aaKnown RBP16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 DUSP9Q99956 384 aaKnown RBP16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 MTMR12Q9C0I1 747 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 RWDD2AQ9UIY3 292 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 CTNND2Q9UQB3 1225 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 REV3LO60673 3130 aa16.68■□□□□ 0.26
TRAPPC12-203ENST00000411973 C2orf71A6NGG8 1288 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 LRRIQ3A6PVS8 624 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 HIDE1A8MVS5 230 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 PPEF2O14830 753 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 IKBKBO14920 756 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 CXCL14O95715 111 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 FGFR3P22607 806 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 BRCC3P46736 316 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 GLUD2P49448 558 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 LILRA4P59901 499 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 DPCR1Q3MIW9 517 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 TCEAL5Q5H9L2 206 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 FAM171A1Q5VUB5 890 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 PLPP4Q5VZY2 271 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 LMBRD2Q68DH5 695 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 ZNF516Q92618 1163 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 SYAP1Q96A49 352 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 EEF2KMTQ96G04 330 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 CEP63Q96MT8 703 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 TTPALQ9BTX7 342 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 MRPL17Q9NRX2 175 aaKnown RBP16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 DACH1Q9UI36 760 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 SIX4Q9UIU6 781 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 PCDHGC5Q9Y5F6 944 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 COL6A3P12111 3177 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 EYSQ5T1H1 3165 aa16.67■□□□□ 0.26
TRAPPC12-203ENST00000411973 M0QZQ0 153 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 SYN3O14994 580 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 ITGB3P05106 788 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 URODP06132 367 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 EPB41P11171 864 aaKnown RBP16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 KRT13P13646 458 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 ERCC5P28715 1186 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 PNPLA4P41247 253 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 TAF6P49848 677 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 VAMP7P51809 220 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 DLG4P78352 724 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 RBP5P82980 135 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 BFSP1Q12934 665 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 RTP2Q5QGT7 225 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 C1orf220Q5T0J3 134 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 KIAA1841Q6NSI8 718 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 TRAPPC11Q7Z392 1133 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 FILIP1Q7Z7B0 1213 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 CSGALNACT2Q8N6G5 542 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 LRRC52Q8N7C0 313 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 MAFAQ8NHW3 353 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 PIK3R5Q8WYR1 880 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 FAM84AQ96KN4 292 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 MED15Q96RN5 788 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 CDCA3Q99618 268 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 RXFP1Q9HBX9 757 aa16.66■□□□□ 0.26
TRAPPC12-203ENST00000411973 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 I3L4J1 428 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 TULP1O00294 542 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 SPTLC1O15269 473 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 NCK2O43639 380 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 CSPG5O95196 566 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 C4BPAP04003 597 aaKnown RBP16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 POLR2BP30876 1174 aaKnown RBP16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 STX17P56962 302 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 COL19A1Q14993 1142 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 DUSP6Q16828 381 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 SKOR2Q2VWA4 1001 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 CAVIN1Q6NZI2 390 aaKnown RBP16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 PDXDC1Q6P996 788 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 SASS6Q6UVJ0 657 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 ADGRD2Q7Z7M1 963 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 MICALL1Q8N3F8 863 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 AUTS2Q8WXX7 1259 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 B3GALT6Q96L58 329 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 ZNF560Q96MR9 790 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 PCDHB8Q9UN66 801 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 AGAP1Q9UPQ3 857 aa16.65■□□□□ 0.26
TRAPPC12-203ENST00000411973 FSD2A1L4K1 749 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms