RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 GRAMD1CQ8IYS0 662 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SAMD3Q8N6K7 520 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PPM1NQ8N819 430 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 C3orf20Q8ND61 904 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ACRBPQ8NEB7 543 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 NLGN4YQ8NFZ3 816 aaPredicted RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 BRIX1Q8TDN6 353 aaKnown RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TSPEARQ8WU66 669 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CASKIN2Q8WXE0 1202 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 HPS3Q969F9 1004 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TNIP3Q96KP6 325 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SELENOOQ9BVL4 669 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PLA2G12BQ9BX93 195 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 REXO4Q9GZR2 422 aaKnown RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SIK2Q9H0K1 926 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 C12orf65Q9H3J6 166 aaKnown RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 NELFAQ9H3P2 528 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 MS4A5Q9H3V2 200 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 WDCPQ9H6R7 721 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SARS2Q9NP81 518 aaKnown RBP3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CALCOCO1Q9P1Z2 691 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 RBPJLQ9UBG7 517 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 INTUQ9ULD6 942 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 STXBP5LQ9Y2K9 1186 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 NR2E1Q9Y466 385 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ZMYM3Q14202 1370 aa3.23□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TCOF1Q13428 1488 aaKnown RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PLEKHH2Q8IVE3 1493 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 A0A1W2PR48 441 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ANO9A1A5B4 782 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 LCHNA4D1U4 455 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CAPN8A6NHC0 703 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ZAR1LA6NP61 321 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CYP27B1O15528 508 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PCDHGA12O60330 932 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 RPS6KA4O75676 772 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 EIF3JO75822 258 aaKnown RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 IPO13O94829 963 aaKnown RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ZBED1O96006 694 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 FTLP02792 175 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SNRPA1P09661 255 aaKnown RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ZNF888P0CJ79 500 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 GAAP10253 952 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 MTHFD1P11586 935 aaKnown RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CTSSP25774 331 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 MGAT1P26572 445 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 HSPA1LP34931 641 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 MSX2P35548 267 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 STAT5BP51692 787 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 BPIFB4P59827 614 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 HHEXQ03014 270 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 BTKQ06187 659 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 NFYCQ13952 458 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PCOLCEQ15113 449 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 GORABQ5T7V8 394 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 ZNF772Q68DY9 489 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TRIM68Q6AZZ1 485 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CCDC149Q6ZUS6 474 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SGMS1Q86VZ5 419 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TMPRSS6Q8IU80 811 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SLC41A1Q8IVJ1 513 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TPH2Q8IWU9 490 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 RHOT1Q8IXI2 618 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CMIPQ8IY22 773 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 OR7D4Q8NG98 312 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SLC35G2Q8TBE7 412 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 DIS3LQ8TF46 1054 aaKnown RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 NRG4Q8WWG1 115 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 NKD2Q969F2 451 aaPredicted RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SUCLG2Q96I99 432 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TMEM60Q9H2L4 133 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 GPRC5DQ9NZD1 345 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CDC42EP3Q9UKI2 254 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 TMPRSS11EQ9UL52 423 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 HDAC5Q9UQL6 1122 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PCDHGA9Q9Y5G4 932 aaKnown RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PCDHGA8Q9Y5G5 932 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PCDHGA7Q9Y5G6 932 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PCDHGA6Q9Y5G7 932 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 PCDHGA3Q9Y5H0 932 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 RBM8AQ9Y5S9 174 aaKnown RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 COMMD10Q9Y6G5 202 aa3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 RIMS1Q86UR5 1692 aaKnown RBP3.22□□□□□ -1.89
RNU6-1140P-201ENST00000410517 FRMPD1Q5SYB0 1578 aa3.21□□□□□ -1.89
RNU6-1140P-201ENST00000410517 CCDC154A6NI56 674 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 B5MCH6 92 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GOLIM4O00461 696 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 HTRA2O43464 458 aaPredicted RBP3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GPR32O75388 356 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ZRANB2O95218 330 aaKnown RBP eCLIP3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 PEX11BO96011 259 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 HRGP04196 525 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 GNAI2P04899 355 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 TRIM27P14373 513 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FLT3LGP49771 235 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 RRADP55042 308 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 FOXL1Q12952 345 aa3.21□□□□□ -1.9
RNU6-1140P-201ENST00000410517 ADAM15Q13444 863 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms