RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 ARHGEF25Q86VW2 580 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 CBARPQ8N350 705 aaPredicted RBP2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 Q8NA96 180 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 CAGE1Q8TC20 777 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 ACTRT2Q8TDY3 377 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 SSH3Q8TE77 659 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 SLC9A6Q92581 669 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 JADE3Q92613 823 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 TMX3Q96JJ7 454 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 PNKPQ96T60 521 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 LRFN3Q9BTN0 628 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 DUSP26Q9BV47 211 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 TLR10Q9BXR5 811 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 C11orf54Q9H0W9 315 aaPredicted RBP2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 TDP1Q9NUW8 608 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 MKS1Q9NXB0 559 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 KCTD5Q9NXV2 234 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 VSX1Q9NZR4 365 aaPredicted RBP2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 FOXJ2Q9P0K8 574 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 LRIT1Q9P2V4 623 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 PRKAB1Q9Y478 270 aa2.73□□□□□ -1.97
RNU2-54P-201ENST00000410299 TRGV11A0A075B6L2 103 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 GRM6O15303 877 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 PCDHGA12O60330 932 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 HAUS5O94927 633 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 AGFG2O95081 481 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 IGLV2-14P01704 120 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 ZNF280AP59817 542 aaPredicted RBP2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 IL10RAQ13651 578 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 SF3B3Q15393 1217 aaKnown RBP2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 FLYWCH1Q4VC44 716 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 UTP14CQ5TAP6 766 aaKnown RBP2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 MIGA2Q7L4E1 593 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 COLGALT2Q8IYK4 626 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 LNX2Q8N448 690 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 NSUN7Q8NE18 718 aaKnown RBP2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 C1orf162Q8NEQ5 155 aaPredicted RBP2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 IFI44Q8TCB0 444 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 TMEM125Q96AQ2 219 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 FAXDC2Q96IV6 333 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 PDLIM2Q96JY6 352 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 MED15Q96RN5 788 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 SPATA5L1Q9BVQ7 753 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 PUS7LQ9H0K6 701 aaKnown RBP2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 CCDC8Q9H0W5 538 aaPredicted RBP2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 IL17RBQ9NRM6 502 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 SAP30BPQ9UHR5 308 aaKnown RBP2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 MCM8Q9UJA3 840 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 SLC45A2Q9UMX9 530 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 LIMCH1Q9UPQ0 1083 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 DMTF1Q9Y222 760 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 CDYLQ9Y232 598 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 PCDHGA9Q9Y5G4 932 aaKnown RBP2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 PCDHGA8Q9Y5G5 932 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 PCDHGA7Q9Y5G6 932 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 PCDHGA6Q9Y5G7 932 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 PCDHGA3Q9Y5H0 932 aa2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 SETD1BQ9UPS6 1966 aaKnown RBP2.72□□□□□ -1.97
RNU2-54P-201ENST00000410299 KLHL33A6NCF5 533 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 CCDC154A6NI56 674 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 LRRC3CA6NJW4 275 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 XPOTO43592 962 aaKnown RBP2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 PEX1O43933 1283 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 C1QL1O75973 258 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 MATN4O95460 622 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 MYBL2P10244 700 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 GATA3P23771 443 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 EDNRBP24530 442 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 ELLP55199 621 aaPredicted RBP2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 CDC42EP1Q00587 391 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 ATP2B3Q16720 1220 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 ABCB5Q2M3G0 1257 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 C3orf36Q3SXR2 165 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 CD300EQ496F6 205 aaPredicted RBP2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 PABPC1LQ4VXU2 614 aaKnown RBP2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 ZKSCAN2Q63HK3 967 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 SP5Q6BEB4 398 aaPredicted RBP2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 TSHZ1Q6ZSZ6 1077 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 NLGN4YQ8NFZ3 816 aaPredicted RBP2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 SLC30A5Q8TAD4 765 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 ZNF384Q8TF68 577 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 SSH1Q8WYL5 1049 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 KAT5Q92993 513 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 HDAC10Q969S8 669 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 KLHL32Q96NJ5 620 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 KLK15Q9H2R5 256 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 SPC25Q9HBM1 224 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 SEMA4GQ9NTN9 838 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 ATP8A1Q9Y2Q0 1164 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 IPPQ9Y573 584 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 PCDHB1Q9Y5F3 818 aa2.71□□□□□ -1.98
RNU2-54P-201ENST00000410299 PRAMEF33A0A0G2JMD5 474 aa2.7□□□□□ -1.98
RNU2-54P-201ENST00000410299 A0A1W2PS29 197 aa2.7□□□□□ -1.98
RNU2-54P-201ENST00000410299 YY2O15391 372 aa2.7□□□□□ -1.98
RNU2-54P-201ENST00000410299 HTRA2O43464 458 aaPredicted RBP2.7□□□□□ -1.98
RNU2-54P-201ENST00000410299 PRAMEF10O60809 474 aa2.7□□□□□ -1.98
RNU2-54P-201ENST00000410299 SLC43A1O75387 559 aa2.7□□□□□ -1.98
RNU2-54P-201ENST00000410299 KATNA1O75449 491 aa2.7□□□□□ -1.98
RNU2-54P-201ENST00000410299 CD1AP06126 327 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms