RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 PCDHB8Q9UN66 801 aa15.81■□□□□ 0.12
MCF2L-210ENST00000409954 MTCL1Q9Y4B5 1905 aaKnown RBP15.81■□□□□ 0.12
MCF2L-210ENST00000409954 M0QZQ0 153 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 HNRNPDLO14979 420 aaKnown RBP15.8■□□□□ 0.12
MCF2L-210ENST00000409954 MEFVO15553 781 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-210ENST00000409954 OAZ2O95190 189 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 GTF2BQ00403 316 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 POU5F1Q01860 360 aaKnown RBP15.8■□□□□ 0.12
MCF2L-210ENST00000409954 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-210ENST00000409954 PRKCQQ04759 706 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 PPP2R3AQ06190 1150 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 MCM6Q14566 821 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 ANGPT1Q15389 498 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 SLC44A4Q53GD3 710 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 CYP4A22Q5TCH4 519 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 SLFN12LQ6IEE8 588 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 IQCEQ6IPM2 695 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 KRI1Q8N9T8 703 aaKnown RBP15.8■□□□□ 0.12
MCF2L-210ENST00000409954 NKD2Q969F2 451 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-210ENST00000409954 KIF12Q96FN5 646 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 ZNF512Q96ME7 567 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-210ENST00000409954 NELL2Q99435 816 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 SEMA4AQ9H3S1 761 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 HCFC1R1Q9NWW0 138 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 CCDC39Q9UFE4 941 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 PLXNA3P51805 1871 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 DENND4AQ7Z401 1863 aa15.8■□□□□ 0.12
MCF2L-210ENST00000409954 A0A0B4J269 797 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 LACTBL1A8MY62 500 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 ECI2O75521 394 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 CXCL8P10145 99 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 PLCG1P19174 1290 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 YWHAHQ04917 246 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-210ENST00000409954 USP37Q86T82 979 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 NPAS3Q8IXF0 933 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 LEMD2Q8NC56 503 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 LARP4BQ92615 738 aaKnown RBP15.79■□□□□ 0.12
MCF2L-210ENST00000409954 MCRS1Q96EZ8 462 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 OSBPL6Q9BZF3 934 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 HAPLN2Q9GZV7 340 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 ST6GALNAC4Q9H4F1 302 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 ZHX3Q9H4I2 956 aa15.79■□□□□ 0.12
MCF2L-210ENST00000409954 C2orf16Q68DN1 1984 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 KANSL1LA0AUZ9 987 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 K7ENM7 598 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 TBCAO75347 108 aaKnown RBP15.78■□□□□ 0.12
MCF2L-210ENST00000409954 SEC24AO95486 1093 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 ADCY1Q08828 1119 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 KARSQ15046 597 aaKnown RBP15.78■□□□□ 0.12
MCF2L-210ENST00000409954 POSTNQ15063 836 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 SPATA1Q5VX52 437 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 DSTYKQ6XUX3 929 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 BEST2Q8NFU1 509 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 BORCS6Q96GS4 357 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 CORO1BQ9BR76 489 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 MSTO1Q9BUK6 570 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 GPR88Q9GZN0 384 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 ASB7Q9H672 318 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 TUBGCP4Q9UGJ1 667 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 DERAQ9Y315 318 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 SRPRBQ9Y5M8 271 aaKnown RBP15.78■□□□□ 0.12
MCF2L-210ENST00000409954 INSL5Q9Y5Q6 135 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 KMT2EQ8IZD2 1858 aa15.78■□□□□ 0.12
MCF2L-210ENST00000409954 VPS37CA5D8V6 355 aaPredicted RBP15.77■□□□□ 0.12
MCF2L-210ENST00000409954 OR6C75A6NL08 312 aa15.77■□□□□ 0.12
MCF2L-210ENST00000409954 TYMPP19971 482 aa15.77■□□□□ 0.12
MCF2L-210ENST00000409954 TNFSF9P41273 254 aa15.77■□□□□ 0.12
MCF2L-210ENST00000409954 AARSP49588 968 aaKnown RBP eCLIP15.77■□□□□ 0.12
MCF2L-210ENST00000409954 GRIN1Q05586 938 aa15.77■□□□□ 0.12
MCF2L-210ENST00000409954 SPAG1Q07617 926 aa15.77■□□□□ 0.12
MCF2L-210ENST00000409954 SNW1Q13573 536 aaKnown RBP15.77■□□□□ 0.12
MCF2L-210ENST00000409954 ENOX2Q16206 610 aaKnown RBP15.77■□□□□ 0.12
MCF2L-210ENST00000409954 PDZD4Q76G19 769 aaPredicted RBP15.77■□□□□ 0.12
MCF2L-210ENST00000409954 ZNF720Q7Z2F6 126 aa15.77■□□□□ 0.12
MCF2L-210ENST00000409954 MAP4K3Q8IVH8 894 aa15.77■□□□□ 0.12
MCF2L-210ENST00000409954 ELSPBP1Q96BH3 223 aa15.77■□□□□ 0.12
MCF2L-210ENST00000409954 DDX23Q9BUQ8 820 aaKnown RBP15.77■□□□□ 0.12
MCF2L-210ENST00000409954 ZFP14Q9HCL3 533 aa15.77■□□□□ 0.12
MCF2L-210ENST00000409954 DLGAP2Q9P1A6 1054 aa15.77■□□□□ 0.12
MCF2L-210ENST00000409954 STK17AQ9UEE5 414 aa15.77■□□□□ 0.12
MCF2L-210ENST00000409954 CPSF3Q9UKF6 684 aaKnown RBP15.77■□□□□ 0.12
MCF2L-210ENST00000409954 STYXL1Q9Y6J8 313 aa15.77■□□□□ 0.12
MCF2L-210ENST00000409954 ZFHX2Q9C0A1 2572 aaPredicted RBP15.76■□□□□ 0.11
MCF2L-210ENST00000409954 PRR23AA6NEV1 266 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 NCAM2O15394 837 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 FAM189A1O60320 539 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 DCNP07585 359 aaKnown RBP15.76■□□□□ 0.11
MCF2L-210ENST00000409954 CPB1P15086 417 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 TXLNAP40222 546 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 LILRA4P59901 499 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 GPR17Q13304 367 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 PLD1Q13393 1074 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 PTPAQ15257 358 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 MLF2Q15773 248 aaPredicted RBP15.76■□□□□ 0.11
MCF2L-210ENST00000409954 PRSS36Q5K4E3 855 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 RRAGBQ5VZM2 374 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 ARMCX5Q6P1M9 558 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 RNF19BQ6ZMZ0 732 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 SV2BQ7L1I2 683 aa15.76■□□□□ 0.11
MCF2L-210ENST00000409954 ASCL5Q7RTU5 278 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms