RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 STK32BQ9NY57 414 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 NKIRAS2Q9NYR9 191 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 COL20A1Q9P218 1284 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 ABCF2Q9UG63 623 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 FEZ2Q9UHY8 353 aaPredicted RBP5.66□□□□□ -1.5
LSM5-205ENST00000409952 ITGB1BP2Q9UKP3 347 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 PLA2G2DQ9UNK4 145 aa5.66□□□□□ -1.5
LSM5-205ENST00000409952 CTDP1Q9Y5B0 961 aaPredicted RBP5.66□□□□□ -1.5
LSM5-205ENST00000409952 ZC3H12DA2A288 527 aaKnown RBP5.65□□□□□ -1.5
LSM5-205ENST00000409952 F8W031 263 aaPredicted RBP5.65□□□□□ -1.5
LSM5-205ENST00000409952 NRP2O60462 931 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 OPHN1O60890 802 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 NCAM1P13591 858 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 HOXD12P35452 270 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 RGS3P49796 1198 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 TUBP50607 506 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 ATXN1P54253 815 aaKnown RBP5.65□□□□□ -1.5
LSM5-205ENST00000409952 DCAF7P61962 342 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 ZNF200P98182 395 aaPredicted RBP5.65□□□□□ -1.5
LSM5-205ENST00000409952 EFR3AQ14156 821 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 CCNG2Q16589 344 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 KHDC1Q4VXA5 237 aaKnown RBP5.65□□□□□ -1.5
LSM5-205ENST00000409952 ZNF385BQ569K4 471 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 GJC2Q5T442 439 aaPredicted RBP5.65□□□□□ -1.5
LSM5-205ENST00000409952 FBXO38Q6PIJ6 1188 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 FAM180AQ6UWF9 173 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 GAREM2Q75VX8 874 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 FAM129CQ86XR2 697 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 CNPY4Q8N129 248 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 NKAIN3Q8N8D7 197 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 STT3BQ8TCJ2 826 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 CLEC4DQ8WXI8 215 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 HERVK_113Q902F9 699 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 NMD3Q96D46 503 aaKnown RBP5.65□□□□□ -1.5
LSM5-205ENST00000409952 MAELQ96JY0 434 aaKnown RBP5.65□□□□□ -1.5
LSM5-205ENST00000409952 MRGPRX1Q96LB2 322 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 DMRTA2Q96SC8 542 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 PITHD1Q9GZP4 211 aaPredicted RBP5.65□□□□□ -1.5
LSM5-205ENST00000409952 LMAN2LQ9H0V9 348 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 SH3GLB2Q9NR46 395 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 OLA1Q9NTK5 396 aaKnown RBP5.65□□□□□ -1.5
LSM5-205ENST00000409952 NSMCE4AQ9NXX6 385 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.65□□□□□ -1.5
LSM5-205ENST00000409952 BTBD7Q9P203 1132 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 CNOT6Q9ULM6 557 aaKnown RBP5.65□□□□□ -1.5
LSM5-205ENST00000409952 MAN2B2Q9Y2E5 1009 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 PCDHB4Q9Y5E5 795 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 IRAK3Q9Y616 596 aa5.65□□□□□ -1.5
LSM5-205ENST00000409952 KAT6BQ8WYB5 2073 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 A0A087X0M5 115 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 A0A1B0GX30 115 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 A0A1W2PQJ5 194 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 FSD2A1L4K1 749 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 AQP12BA6NM10 295 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 PODXLO00592 558 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 THAP12O43422 761 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 ZBED4O75132 1171 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 ZBTB7AO95365 584 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 NTRK1P04629 796 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 ANXA2P07355 339 aaKnown RBP5.64□□□□□ -1.51
LSM5-205ENST00000409952 HNRNPLP14866 589 aaKnown RBP eCLIP5.64□□□□□ -1.51
LSM5-205ENST00000409952 PI3P19957 117 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 XPAP23025 273 aaPredicted RBP5.64□□□□□ -1.51
LSM5-205ENST00000409952 CTSSP25774 331 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 ADD2P35612 726 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 KRT20P35900 424 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 TRPC3Q13507 836 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 RAB39AQ14964 217 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 SEPT2Q15019 361 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 TARBP2Q15633 366 aaKnown RBP5.64□□□□□ -1.51
LSM5-205ENST00000409952 C3orf38Q5JPI3 329 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 ANKRD45Q5TZF3 282 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 CATSPERGQ6ZRH7 1159 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 RINLQ6ZS11 566 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 CABP7Q86V35 215 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 CPOQ8IVL8 374 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 GLB1L2Q8IW92 636 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 FTSJ3Q8IY81 847 aaKnown RBP5.64□□□□□ -1.51
LSM5-205ENST00000409952 TTLL11Q8NHH1 800 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.64□□□□□ -1.512e-7■□□□□ 9.7
LSM5-205ENST00000409952 BRIX1Q8TDN6 353 aaKnown RBP5.64□□□□□ -1.51
LSM5-205ENST00000409952 UCMAQ8WVF2 138 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 KBTBD7Q8WVZ9 684 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 CPA5Q8WXQ8 436 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 RUBCNQ92622 972 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 HTRA1Q92743 480 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 PEX11GQ96HA9 241 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 SNX22Q96L94 193 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 MRGPRX4Q96LA9 322 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 WDCPQ9H6R7 721 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 SACM1LQ9NTJ5 587 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 CALCOCO1Q9P1Z2 691 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 KIF17Q9P2E2 1029 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 AASSQ9UDR5 926 aa5.64□□□□□ -1.51
LSM5-205ENST00000409952 A0A0A6YYJ9 748 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 A0A0B4J269 797 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 FAM170AA1A519 330 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 CLCA1A8K7I4 914 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 RFXAPO00287 272 aa5.63□□□□□ -1.51
LSM5-205ENST00000409952 NUAK1O60285 661 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms