RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 SCN1AP35498 2009 aa18.83■□□□□ 0.61
LRPPRC-203ENST00000409946 ZNF185O15231 689 aa18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 ITGB3P05106 788 aa18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 TBXAS1P24557 533 aaPredicted RBP18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 HOXD10P28358 340 aa18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 SSTR3P32745 418 aaPredicted RBP18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 CBX1P83916 185 aa18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 PTPROQ16827 1216 aa18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 MAP3K21Q5TCX8 1036 aa18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 NOTUMQ6P988 496 aa18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 PSMB7Q99436 277 aa18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 NXF3Q9H4D5 531 aaKnown RBP18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 OSGEPQ9NPF4 335 aa18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 JRKLQ9Y4A0 524 aa18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 SAR1BQ9Y6B6 198 aa18.83■□□□□ 0.6
LRPPRC-203ENST00000409946 NCANO14594 1321 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 GRIN2DO15399 1336 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 FTLP02792 175 aaPredicted RBP18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 TMEM253P0C7T8 217 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 CD58P19256 250 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 CRYBB1P53674 252 aaPredicted RBP18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 TMEM132DQ14C87 1099 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 KYAT1Q16773 422 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 SGSM1Q2NKQ1 1148 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 CCSAPQ6IQ19 270 aaPredicted RBP18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 UBR7Q8N806 425 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 RBBP8NLQ8NC74 664 aaPredicted RBP18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 RABGGTAQ92696 567 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 CAPZA3Q96KX2 299 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 APOL6Q9BWW8 343 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 NIF3L1Q9GZT8 377 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 ASB7Q9H672 318 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 RNF19AQ9NV58 838 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 PACSIN2Q9UNF0 486 aaPredicted RBP18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 PCDHGC5Q9Y5F6 944 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 CDY2AQ9Y6F7 541 aa18.82■□□□□ 0.6
LRPPRC-203ENST00000409946 SPDYE4A6NLX3 237 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 CFHP08603 1231 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 CTSHP09668 335 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 RAP1GAPP47736 663 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 TAF2Q6P1X5 1199 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 NME8Q8N427 588 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 CXorf38Q8TB03 319 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 CTNNBL1Q8WYA6 563 aaPredicted RBP18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 CELF4Q9BZC1 486 aaKnown RBP18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 ISCUQ9H1K1 167 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 NXF1Q9UBU9 619 aaKnown RBP18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 CHORDC1Q9UHD1 332 aaPredicted RBP18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 DDX20Q9UHI6 824 aaKnown RBP18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 ATMINO43313 823 aaPredicted RBP18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 WEE2P0C1S8 567 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 ASPAP45381 313 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 DNA2P51530 1060 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 MRPS6P82932 125 aaKnown RBP18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 FAM228AQ86W67 206 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 CEP112Q8N8E3 955 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 TPCN2Q8NHX9 752 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 SLC35G2Q8TBE7 412 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 KIF12Q96FN5 646 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 TLR10Q9BXR5 811 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 SNX12Q9UMY4 172 aa18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 NOC2LQ9Y3T9 749 aaKnown RBP18.81■□□□□ 0.6
LRPPRC-203ENST00000409946 A0A0A6YYK5 440 aaPredicted RBP18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 ANKRD62A6NC57 917 aa18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 RTN2O75298 545 aa18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 CST5P28325 142 aaPredicted RBP18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 POLR2BP30876 1174 aaKnown RBP18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 CXCR5P32302 372 aa18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 CLCN6P51797 869 aa18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 POU5F1Q01860 360 aaKnown RBP18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 UBXN11Q5T124 520 aa18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 ZNF296Q8WUU4 475 aaPredicted RBP18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 RFFLQ8WZ73 363 aa18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 GOLGA1Q92805 767 aa18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 SNX27Q96L92 541 aa18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 TRIM6Q9C030 488 aaPredicted RBP18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 CNTN6Q9UQ52 1028 aa18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 PCDHB2Q9Y5E7 798 aa18.8■□□□□ 0.6
LRPPRC-203ENST00000409946 AKAP5P24588 427 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 GNA15P30679 374 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 WHAMMP3Q1A5X7 153 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 ZNF394Q53GI3 561 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 GLRA4Q5JXX5 417 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 SERINC5Q86VE9 423 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 LRRC57Q8N9N7 239 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 COG1Q8WTW3 980 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 ZMAT2Q96NC0 199 aaKnown RBP18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 CISHQ9NSE2 258 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 ZNF446Q9NWS9 450 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 TSKSQ9UJT2 592 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 COG5Q9UP83 839 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 TRPV2Q9Y5S1 764 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 ATP8B1O43520 1251 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 RECQL4O94761 1208 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 INHAP05111 366 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 AXLP30530 894 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 ZNF132P52740 706 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 PCBP1Q15365 356 aaKnown RBP eCLIP18.79■□□□□ 0.62e-6■□□□□ 10.2
LRPPRC-203ENST00000409946 CLEC16AQ2KHT3 1053 aa18.79■□□□□ 0.6
LRPPRC-203ENST00000409946 TEX35Q5T0J7 233 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms