RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 PI15O43692 258 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 TBC1D4O60343 1298 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 LRPAP1P30533 357 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 NBL1P41271 181 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 ARPP19P56211 112 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 KARSQ15046 597 aaKnown RBP16.05■□□□□ 0.16
CBX3-203ENST00000409747 PARM1Q6UWI2 310 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 NPAS3Q8IXF0 933 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 TCEAL8Q8IYN2 117 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 DTWD2Q8NBA8 298 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 DDX12PQ92771 950 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 CCSER1Q9C0I3 900 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 RPF1Q9H9Y2 349 aaKnown RBP16.05■□□□□ 0.16
CBX3-203ENST00000409747 CYP4F11Q9HBI6 524 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 GDE1Q9NZC3 331 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 RHOP08100 348 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 PTPN2P17706 415 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 PFKPQ01813 784 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 MCM6Q14566 821 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 CD302Q8IX05 232 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 ELMOD1Q8N336 334 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 KRI1Q8N9T8 703 aaKnown RBP16.05■□□□□ 0.16
CBX3-203ENST00000409747 HAPLN2Q9GZV7 340 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 ZHX3Q9H4I2 956 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 PAX3P23760 479 aa16.04■□□□□ 0.16
CBX3-203ENST00000409747 TXLNAP40222 546 aa16.04■□□□□ 0.16
CBX3-203ENST00000409747 YWHAHQ04917 246 aaPredicted RBP16.04■□□□□ 0.16
CBX3-203ENST00000409747 ANGPT1Q15389 498 aa16.04■□□□□ 0.16
CBX3-203ENST00000409747 MAP4K3Q8IVH8 894 aa16.04■□□□□ 0.16
CBX3-203ENST00000409747 MSTO1Q9BUK6 570 aa16.04■□□□□ 0.16
CBX3-203ENST00000409747 STK17AQ9UEE5 414 aa16.04■□□□□ 0.16
CBX3-203ENST00000409747 CCDC39Q9UFE4 941 aa16.04■□□□□ 0.16
CBX3-203ENST00000409747 AFF4Q9UHB7 1163 aaKnown RBP16.04■□□□□ 0.16
CBX3-203ENST00000409747 INSL5Q9Y5Q6 135 aa16.04■□□□□ 0.16
CBX3-203ENST00000409747 DOCK6Q96HP0 2047 aa16.04■□□□□ 0.16
CBX3-203ENST00000409747 M0QZQ0 153 aa16.03■□□□□ 0.16
CBX3-203ENST00000409747 ZNF197O14709 1029 aa16.03■□□□□ 0.16
CBX3-203ENST00000409747 CPB1P15086 417 aa16.03■□□□□ 0.16
CBX3-203ENST00000409747 DDIT3P35638 169 aa16.03■□□□□ 0.16
CBX3-203ENST00000409747 TNFSF9P41273 254 aa16.03■□□□□ 0.16
CBX3-203ENST00000409747 GTF2BQ00403 316 aa16.03■□□□□ 0.16
CBX3-203ENST00000409747 GRIN1Q05586 938 aa16.03■□□□□ 0.16
CBX3-203ENST00000409747 ZBTB6Q15916 424 aa16.03■□□□□ 0.16
CBX3-203ENST00000409747 LRRC15Q8TF66 581 aa16.03■□□□□ 0.16
CBX3-203ENST00000409747 SIT1Q9Y3P8 196 aa16.03■□□□□ 0.16
CBX3-203ENST00000409747 VPS13AQ96RL7 3174 aa16.03■□□□□ 0.16
CBX3-203ENST00000409747 A0A0B4J269 797 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 LACTBL1A8MY62 500 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 FAM189A1O60320 539 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 ECI2O75521 394 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 MICAL2O94851 1124 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 AARSP49588 968 aaKnown RBP eCLIP16.02■□□□□ 0.16
CBX3-203ENST00000409747 GPC5P78333 572 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 PRKCQQ04759 706 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 SPAG1Q07617 926 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 ENOX2Q16206 610 aaKnown RBP16.02■□□□□ 0.16
CBX3-203ENST00000409747 IQCEQ6IPM2 695 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 PDZD4Q76G19 769 aaPredicted RBP16.02■□□□□ 0.16
CBX3-203ENST00000409747 USP37Q86T82 979 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 LEMD2Q8NC56 503 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 BEST2Q8NFU1 509 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 ING5Q8WYH8 240 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 RPP25Q9BUL9 199 aaKnown RBP16.02■□□□□ 0.16
CBX3-203ENST00000409747 ST6GALNAC4Q9H4F1 302 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 NOTCH4Q99466 2003 aa16.02■□□□□ 0.16
CBX3-203ENST00000409747 OAZ2O95190 189 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 ADRB2P07550 413 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 STARD6P59095 220 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 ADCY1Q08828 1119 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 SLC5A9Q2M3M2 681 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 CYP4A22Q5TCH4 519 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 SLFN12LQ6IEE8 588 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 DSTYKQ6XUX3 929 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 ST13P5Q8NFI4 369 aaPredicted RBP16.02■□□□□ 0.15
CBX3-203ENST00000409747 HVCN1Q96D96 273 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 KXD1Q9BQD3 176 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 CORO1BQ9BR76 489 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 DERAQ9Y315 318 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 CLIC4Q9Y696 253 aa16.02■□□□□ 0.15
CBX3-203ENST00000409747 OR6C75A6NL08 312 aa16.01■□□□□ 0.15
CBX3-203ENST00000409747 SEC24AO95486 1093 aa16.01■□□□□ 0.15
CBX3-203ENST00000409747 PLD1Q13393 1074 aa16.01■□□□□ 0.15
CBX3-203ENST00000409747 PTPAQ15257 358 aa16.01■□□□□ 0.15
CBX3-203ENST00000409747 SPATA1Q5VX52 437 aa16.01■□□□□ 0.15
CBX3-203ENST00000409747 PJA1Q8NG27 643 aa16.01■□□□□ 0.15
CBX3-203ENST00000409747 NKD2Q969F2 451 aaPredicted RBP16.01■□□□□ 0.15
CBX3-203ENST00000409747 MCRS1Q96EZ8 462 aa16.01■□□□□ 0.15
CBX3-203ENST00000409747 INTS4Q96HW7 963 aaKnown RBP16.01■□□□□ 0.15
CBX3-203ENST00000409747 ZNF512Q96ME7 567 aaPredicted RBP16.01■□□□□ 0.15
CBX3-203ENST00000409747 FIZ1Q96SL8 496 aa16.01■□□□□ 0.15
CBX3-203ENST00000409747 SEL1LQ9UBV2 794 aa16.01■□□□□ 0.15
CBX3-203ENST00000409747 CPSF3Q9UKF6 684 aaKnown RBP16.01■□□□□ 0.15
CBX3-203ENST00000409747 SRPRBQ9Y5M8 271 aaKnown RBP16.01■□□□□ 0.15
CBX3-203ENST00000409747 DMDP11532 3685 aa16.01■□□□□ 0.15
CBX3-203ENST00000409747 ZFHX2Q9C0A1 2572 aaPredicted RBP16■□□□□ 0.15
CBX3-203ENST00000409747 PRR23AA6NEV1 266 aa16■□□□□ 0.15
CBX3-203ENST00000409747 ODC1P11926 461 aa16■□□□□ 0.15
CBX3-203ENST00000409747 CEBPBP17676 345 aa16■□□□□ 0.15
CBX3-203ENST00000409747 TYMPP19971 482 aa16■□□□□ 0.15
CBX3-203ENST00000409747 NMT1P30419 496 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms