RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 COL25A1Q9BXS0 654 aaPredicted RBP33.79■■■■□ 3
TRAF3IP1-203ENST00000409739 CLIC2O15247 247 aa33.78■■■■□ 3
TRAF3IP1-203ENST00000409739 KCNB1Q14721 858 aa33.78■■■■□ 3
TRAF3IP1-203ENST00000409739 SYCE2Q6PIF2 218 aa33.78■■■■□ 3
TRAF3IP1-203ENST00000409739 MCM4P33991 863 aa33.77■■■■□ 3
TRAF3IP1-203ENST00000409739 SUSD3Q96L08 255 aa33.77■■■■□ 3
TRAF3IP1-203ENST00000409739 FBXL18Q96ME1 805 aa33.77■■■■□ 3
TRAF3IP1-203ENST00000409739 TIGD1Q96MW7 591 aa33.77■■■■□ 3
TRAF3IP1-203ENST00000409739 CGNQ9P2M7 1197 aaKnown RBP33.77■■■■□ 3
TRAF3IP1-203ENST00000409739 PPEF2O14830 753 aa33.76■■■□□ 2.99
TRAF3IP1-203ENST00000409739 HOXB8P17481 243 aaPredicted RBP33.76■■■□□ 2.99
TRAF3IP1-203ENST00000409739 PDXDC1Q6P996 788 aa33.76■■■□□ 2.99
TRAF3IP1-203ENST00000409739 NT5DC4Q86YG4 428 aa33.76■■■□□ 2.99
TRAF3IP1-203ENST00000409739 CBWD2Q8IUF1 395 aa33.76■■■□□ 2.99
TRAF3IP1-203ENST00000409739 GLYCTKQ8IVS8 523 aa33.76■■■□□ 2.99
TRAF3IP1-203ENST00000409739 C12orf56Q8IXR9 622 aa33.76■■■□□ 2.99
TRAF3IP1-203ENST00000409739 DZANK1Q9NVP4 752 aa33.76■■■□□ 2.99
TRAF3IP1-203ENST00000409739 FAM50BQ9Y247 325 aa33.76■■■□□ 2.99
TRAF3IP1-203ENST00000409739 CUL9Q8IWT3 2517 aa33.76■■■□□ 2.99
TRAF3IP1-203ENST00000409739 GLUD1P00367 558 aa33.75■■■□□ 2.99
TRAF3IP1-203ENST00000409739 CYP2J2P51589 502 aa33.75■■■□□ 2.99
TRAF3IP1-203ENST00000409739 C9orf57Q5W0N0 161 aa33.75■■■□□ 2.99
TRAF3IP1-203ENST00000409739 NECAB3Q96P71 396 aaPredicted RBP33.75■■■□□ 2.99
TRAF3IP1-203ENST00000409739 APOL5Q9BWW9 433 aa33.75■■■□□ 2.99
TRAF3IP1-203ENST00000409739 S1PR5Q9H228 398 aa33.75■■■□□ 2.99
TRAF3IP1-203ENST00000409739 KCTD10Q9H3F6 313 aa33.75■■■□□ 2.99
TRAF3IP1-203ENST00000409739 DENND4AQ7Z401 1863 aa33.75■■■□□ 2.99
TRAF3IP1-203ENST00000409739 ANO9A1A5B4 782 aa33.74■■■□□ 2.99
TRAF3IP1-203ENST00000409739 ZNF233A6NK53 670 aa33.74■■■□□ 2.99
TRAF3IP1-203ENST00000409739 SYN3O14994 580 aa33.74■■■□□ 2.99
TRAF3IP1-203ENST00000409739 AARSP49588 968 aaKnown RBP eCLIP33.74■■■□□ 2.99
TRAF3IP1-203ENST00000409739 SMAD2Q15796 467 aaKnown RBP33.74■■■□□ 2.99
TRAF3IP1-203ENST00000409739 CLSTN3Q9BQT9 956 aa33.74■■■□□ 2.99
TRAF3IP1-203ENST00000409739 KIAA1586Q9HCI6 787 aa33.74■■■□□ 2.99
TRAF3IP1-203ENST00000409739 PDE11AQ9HCR9 933 aa33.74■■■□□ 2.99
TRAF3IP1-203ENST00000409739 DPP3Q9NY33 737 aa33.74■■■□□ 2.99
TRAF3IP1-203ENST00000409739 MTRRQ9UBK8 725 aa33.74■■■□□ 2.99
TRAF3IP1-203ENST00000409739 USP15Q9Y4E8 981 aaPredicted RBP33.74■■■□□ 2.99
TRAF3IP1-203ENST00000409739 PIRO00625 290 aa33.73■■■□□ 2.99
TRAF3IP1-203ENST00000409739 XXYLT1Q8NBI6 393 aa33.73■■■□□ 2.99
TRAF3IP1-203ENST00000409739 GOLGA5Q8TBA6 731 aa33.73■■■□□ 2.99
TRAF3IP1-203ENST00000409739 UHRF1Q96T88 793 aaPredicted RBP33.73■■■□□ 2.99
TRAF3IP1-203ENST00000409739 MAN1C1Q9NR34 630 aa33.73■■■□□ 2.99
TRAF3IP1-203ENST00000409739 TULP1O00294 542 aaPredicted RBP33.72■■■□□ 2.99
TRAF3IP1-203ENST00000409739 ADAM12O43184 909 aa33.72■■■□□ 2.99
TRAF3IP1-203ENST00000409739 TFAMQ00059 246 aaKnown RBP33.72■■■□□ 2.99
TRAF3IP1-203ENST00000409739 SNRNP35Q16560 246 aaKnown RBP33.72■■■□□ 2.99
TRAF3IP1-203ENST00000409739 VARS2Q5ST30 1063 aaKnown RBP33.72■■■□□ 2.99
TRAF3IP1-203ENST00000409739 ANKS3Q6ZW76 656 aa33.72■■■□□ 2.99
TRAF3IP1-203ENST00000409739 PALB2Q86YC2 1186 aa33.72■■■□□ 2.99
TRAF3IP1-203ENST00000409739 FAM84AQ96KN4 292 aa33.72■■■□□ 2.99
TRAF3IP1-203ENST00000409739 M0QZQ0 153 aa33.71■■■□□ 2.99
TRAF3IP1-203ENST00000409739 C12orf76Q8N812 135 aaPredicted RBP33.71■■■□□ 2.99
TRAF3IP1-203ENST00000409739 SUSD6Q92537 303 aa33.71■■■□□ 2.99
TRAF3IP1-203ENST00000409739 PCDHB8Q9UN66 801 aa33.71■■■□□ 2.99
TRAF3IP1-203ENST00000409739 MUC3AQ02505 3323 aa33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 TGM5O43548 720 aa33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 KINO60870 393 aaKnown RBP33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 C1RP00736 705 aa33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 LILRA4P59901 499 aa33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 RARS2Q5T160 578 aaKnown RBP33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 RSPO2Q6UXX9 243 aaPredicted RBP33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 RDH13Q8NBN7 331 aa33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 ERCC4Q92889 916 aaPredicted RBP33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 SFXN1Q9H9B4 322 aa33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 TSHZ2Q9NRE2 1034 aa33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 HOOK1Q9UJC3 728 aaKnown RBP33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 MAPK8IP1Q9UQF2 711 aa33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 BACE2Q9Y5Z0 518 aa33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 PTPRJQ12913 1337 aa33.7■■■□□ 2.99
TRAF3IP1-203ENST00000409739 PDXKO00764 312 aa33.69■■■□□ 2.98
TRAF3IP1-203ENST00000409739 KIF20AO95235 890 aa33.69■■■□□ 2.98
TRAF3IP1-203ENST00000409739 UBE2HP62256 183 aa33.69■■■□□ 2.98
TRAF3IP1-203ENST00000409739 LILRA6Q6PI73 481 aa33.69■■■□□ 2.98
TRAF3IP1-203ENST00000409739 ELOA2Q8IYF1 753 aaPredicted RBP33.69■■■□□ 2.98
TRAF3IP1-203ENST00000409739 SPATA20Q8TB22 786 aa33.69■■■□□ 2.98
TRAF3IP1-203ENST00000409739 CACTINQ8WUQ7 758 aaKnown RBP33.69■■■□□ 2.98
TRAF3IP1-203ENST00000409739 IPO9Q96P70 1041 aaKnown RBP33.69■■■□□ 2.98
TRAF3IP1-203ENST00000409739 RMND1Q9NWS8 449 aa33.69■■■□□ 2.98
TRAF3IP1-203ENST00000409739 CDH22Q9UJ99 828 aa33.69■■■□□ 2.98
TRAF3IP1-203ENST00000409739 SPTLC1O15269 473 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 SPATA31D3P0C874 917 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 ITIH3Q06033 890 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 CYP24A1Q07973 514 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 MRPL58Q14197 206 aaKnown RBP33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 SURF1Q15526 300 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 SPATA31D4Q6ZUB0 917 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 GUF1Q8N442 669 aaKnown RBP33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 C1orf127Q8N9H9 656 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 APPL2Q8NEU8 664 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 GSDMAQ96QA5 445 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 MTMR12Q9C0I1 747 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 ADAM7Q9H2U9 754 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 DMAC2Q9NW81 257 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 PCDHA5Q9Y5H7 936 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 CDY1Q9Y6F8 540 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 DOCK6Q96HP0 2047 aa33.68■■■□□ 2.98
TRAF3IP1-203ENST00000409739 SPDYE4A6NLX3 237 aa33.67■■■□□ 2.98
TRAF3IP1-203ENST00000409739 EXOC3O60645 756 aa33.67■■■□□ 2.98
TRAF3IP1-203ENST00000409739 SMC2O95347 1197 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms