RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SMG5Q9UPR3 1016 aaKnown RBP13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 PCDHGA2Q9Y5H1 932 aa13.93□□□□□ -0.18
CHRNA1-205ENST00000409542 ZMYM2Q9UBW7 1377 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 LRRIQ4A6NIV6 560 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 XYLBO75191 536 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 RECQL4O94761 1208 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 THP07101 528 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 GNL2Q13823 731 aaKnown RBP13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 PABPC1LQ4VXU2 614 aaKnown RBP13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 ZBTB41Q5SVQ8 909 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 EEF1DP3Q658K8 133 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 TANGO2Q6ICL3 276 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 SLFN12Q8IYM2 578 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 KIAA1524Q8TCG1 905 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 ATRIPQ8WXE1 791 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 BSNDQ8WZ55 320 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 TNFRSF25Q93038 417 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 MRFAP1L1Q96HT8 127 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 EPC1Q9H2F5 836 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 KIAA1468Q9P260 1216 aa13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 R3HCC1Q9Y3T6 440 aaKnown RBP13.92□□□□□ -0.18
CHRNA1-205ENST00000409542 DCDC2BA2VCK2 349 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 I3L4J1 428 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 CUTAO60888 179 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 PFKFB1P16118 471 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 CEBPBP17676 345 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 FGFR3P22607 806 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 TKTP29401 623 aaKnown RBP13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 PFKPQ01813 784 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 MTAPQ13126 283 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 SAFBQ15424 915 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 CDCA2Q69YH5 1023 aaPredicted RBP13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 DHX40Q8IX18 779 aaKnown RBP13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 ZNF687Q8N1G0 1237 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 SPC24Q8NBT2 197 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 FOXP1Q9H334 677 aaPredicted RBP13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 POLD4Q9HCU8 107 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 PRMT8Q9NR22 394 aaPredicted RBP13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 MTRRQ9UBK8 725 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 PCDHA12Q9UN75 941 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 HPSEQ9Y251 543 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 MRPS23Q9Y3D9 190 aaKnown RBP13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 CDY1Q9Y6F8 540 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 TRIP11Q15643 1979 aa13.91□□□□□ -0.18
CHRNA1-205ENST00000409542 ZNF202O95125 648 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 RHOP08100 348 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 POU2F2P09086 479 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 SPATA31C1P0DKV0 1188 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 TDGF1P13385 188 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 FCARP24071 287 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 TXKP42681 527 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 FAM187BQ17R55 369 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 GLRA4Q5JXX5 417 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 C3orf58Q8NDZ4 430 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 TCEAL4Q96EI5 215 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 NAP1L4Q99733 375 aaKnown RBP13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 GOLGA2P5Q9HBQ8 144 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 PRMT7Q9NVM4 692 aaPredicted RBP13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 KCNH3Q9ULD8 1083 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 GDAQ9Y2T3 454 aa13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 MORC2Q9Y6X9 1032 aaPredicted RBP13.9□□□□□ -0.18
CHRNA1-205ENST00000409542 ZFHX4Q86UP3 3567 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 BECN2A8MW95 431 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 ECI2O75521 394 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 MAGEA9P43362 315 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 BRCC3P46736 316 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 RPS9P46781 194 aaKnown RBP13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 CLCNKBP51801 687 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 NLRP12P59046 1061 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 GRM2Q14416 872 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 CALCRLQ16602 461 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 LPAL2Q16609 132 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 RESP18Q5W5W9 173 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 ELOA2Q8IYF1 753 aaPredicted RBP13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 BORCS6Q96GS4 357 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 PRIMPOLQ96LW4 560 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 MTMR9Q96QG7 549 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 CCDC113Q9H0I3 377 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 USP18Q9UMW8 372 aa13.89□□□□□ -0.19
CHRNA1-205ENST00000409542 ACACBO00763 2458 aa13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 N4BP3O15049 544 aa13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 MED24O75448 989 aa13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 PRKCBP05771 671 aa13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 CCR2P41597 374 aa13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 ADCY1Q08828 1119 aa13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 ELAVL2Q12926 359 aaKnown RBP13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 PRPF4BQ13523 1007 aaKnown RBP13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 ZRSR1Q15695 479 aaKnown RBP13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 PRSS36Q5K4E3 855 aa13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 ZNF852Q6ZMS4 543 aa13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 PPP1R10Q96QC0 940 aaKnown RBP13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 TMEM60Q9H2L4 133 aa13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 PYCARDQ9ULZ3 195 aa13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 NDRG2Q9UN36 371 aaKnown RBP13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 COL4A2P08572 1712 aa13.88□□□□□ -0.19
CHRNA1-205ENST00000409542 NEMFO60524 1076 aa13.87□□□□□ -0.19
CHRNA1-205ENST00000409542 B3GAT3O94766 335 aa13.87□□□□□ -0.19
CHRNA1-205ENST00000409542 ATP2B1P20020 1258 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms