RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 EFNA5P52803 228 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 ATXN1P54253 815 aaKnown RBP8.52□□□□□ -1.05
LSM5-202ENST00000409292 NTHL1P78549 312 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 LRRC32Q14392 662 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 SAFBQ15424 915 aaKnown RBP eCLIP8.52□□□□□ -1.05
LSM5-202ENST00000409292 FAM187BQ17R55 369 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 LAIR1Q6GTX8 287 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 PRR23BQ6ZRT6 265 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 PDZD4Q76G19 769 aaPredicted RBP8.52□□□□□ -1.05
LSM5-202ENST00000409292 MAEAQ7L5Y9 396 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 CDR2LQ86X02 465 aaPredicted RBP8.52□□□□□ -1.05
LSM5-202ENST00000409292 NPAS3Q8IXF0 933 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 ZBTB44Q8NCP5 570 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 ITFG1Q8TB96 612 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 NETO1Q8TDF5 533 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 CSGALNACT1Q8TDX6 532 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 ASAP3Q8TDY4 903 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 DEPDC1BQ8WUY9 529 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 ING5Q8WYH8 240 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 RABGGTAQ92696 567 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 HAS1Q92839 578 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 E2F7Q96AV8 911 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 CLDN23Q96B33 292 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 MCRS1Q96EZ8 462 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 MSANTD3Q96H12 275 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 ZNF512Q96ME7 567 aaPredicted RBP8.52□□□□□ -1.05
LSM5-202ENST00000409292 RPP25Q9BUL9 199 aaKnown RBP8.52□□□□□ -1.05
LSM5-202ENST00000409292 CCDC94Q9BW85 323 aaPredicted RBP8.52□□□□□ -1.05
LSM5-202ENST00000409292 GPR88Q9GZN0 384 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 XPNPEP1Q9NQW7 623 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 SNTG2Q9NY99 539 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 WRAP73Q9P2S5 460 aaPredicted RBP8.52□□□□□ -1.05
LSM5-202ENST00000409292 MTRRQ9UBK8 725 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 NUB1Q9Y5A7 615 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 CDY1Q9Y6F8 540 aa8.52□□□□□ -1.05
LSM5-202ENST00000409292 CEP250Q9BV73 2442 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 TMEM189-UBE2V1I3L0A0 370 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 ACKR2O00590 384 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 ZNF263O14978 683 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 LRRN2O75325 713 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 RECQL4O94761 1208 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 MICAL2O94851 1124 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 PRKCBP05771 671 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 RETP07949 1114 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 RHOP08100 348 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 CD72P21854 359 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 FGFR3P22607 806 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 MARCKSP29966 332 aaPredicted RBP8.51□□□□□ -1.05
LSM5-202ENST00000409292 CNR2P34972 360 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 NAMPTP43490 491 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 CXCL12P48061 93 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 TOB2Q14106 344 aaPredicted RBP8.51□□□□□ -1.05
LSM5-202ENST00000409292 HAUS3Q68CZ6 603 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 IL31Q6EBC2 164 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 HAUS6Q7Z4H7 955 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 GSTCDQ8NEC7 633 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 ST13P5Q8NFI4 369 aaPredicted RBP8.51□□□□□ -1.05
LSM5-202ENST00000409292 ZNF461Q8TAF7 563 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 PIGOQ8TEQ8 1089 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 FAM3CQ92520 227 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 CNTNAP3BQ96NU0 1288 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 HSD17B14Q9BPX1 270 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 CNTNAP3Q9BZ76 1288 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 FZD8Q9H461 694 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 CYP4F11Q9HBI6 524 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 TUFT1Q9NNX1 390 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 AVENQ9NQS1 362 aaPredicted RBP8.51□□□□□ -1.05
LSM5-202ENST00000409292 HEBP1Q9NRV9 189 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 DNMT3BQ9UBC3 853 aaKnown RBP8.51□□□□□ -1.05
LSM5-202ENST00000409292 ORC3Q9UBD5 711 aaPredicted RBP8.51□□□□□ -1.05
LSM5-202ENST00000409292 KCNG1Q9UIX4 513 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 MAFFQ9ULX9 164 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 NDRG2Q9UN36 371 aaKnown RBP8.51□□□□□ -1.05
LSM5-202ENST00000409292 PCDHGC3Q9UN70 934 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 GDAQ9Y2T3 454 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.51□□□□□ -1.05
LSM5-202ENST00000409292 TPRP12270 2363 aaKnown RBP8.51□□□□□ -1.05
LSM5-202ENST00000409292 CFAP54Q96N23 3096 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 USP34Q70CQ2 3546 aa8.51□□□□□ -1.05
LSM5-202ENST00000409292 K7ERI5 159 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 SYN3O14994 580 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 ZBTB39O15060 712 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 EIF5BO60841 1220 aaKnown RBP8.5□□□□□ -1.05
LSM5-202ENST00000409292 LILRB5O75023 590 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 PSMC3P17980 439 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 TARSP26639 723 aaKnown RBP8.5□□□□□ -1.05
LSM5-202ENST00000409292 SMCPP49901 116 aaPredicted RBP8.5□□□□□ -1.05
LSM5-202ENST00000409292 ARPP19P56211 112 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 DMWDQ09019 674 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 MTAPQ13126 283 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 PLD1Q13393 1074 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 SIM2Q14190 667 aaPredicted RBP8.5□□□□□ -1.05
LSM5-202ENST00000409292 ST3GAL2Q16842 350 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 TPGS2Q68CL5 300 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 CDCA2Q69YH5 1023 aaPredicted RBP8.5□□□□□ -1.05
LSM5-202ENST00000409292 CEP68Q76N32 757 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.5□□□□□ -1.05
LSM5-202ENST00000409292 NOSTRINQ8IVI9 506 aa8.5□□□□□ -1.05
LSM5-202ENST00000409292 MAML2Q8IZL2 1156 aaPredicted RBP8.5□□□□□ -1.05
LSM5-202ENST00000409292 APPL2Q8NEU8 664 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms