RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 SORBS3O60504 671 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 SERPINH1P50454 418 aaKnown RBP12.71□□□□□ -0.37
SHANK2-203ENST00000409161 SLC18A3Q16572 532 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 PFKFB3Q16875 520 aaPredicted RBP12.71□□□□□ -0.37
SHANK2-203ENST00000409161 TAS2R42Q7RTR8 314 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 INPP5DQ92835 1189 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 LRRC39Q96DD0 335 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 STK33Q9BYT3 514 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 KLHL25Q9H0H3 589 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 FAM153AQ9UHL3 310 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 TCP10L2B9ZVM9 353 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 PDE9AO76083 593 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 TMEM179Q6ZVK1 233 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 KIAA0825Q8IV33 1275 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 APOL4Q9BPW4 351 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 MANSC1Q9H8J5 431 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 FKBP9O95302 570 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 COPB2P35606 906 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 PHKA1P46020 1223 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 CCDC149Q6ZUS6 474 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 FKBP9P1Q75LS8 142 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 TNIP3Q96KP6 325 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 ADGRL3Q9HAR2 1447 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 XPO7Q9UIA9 1087 aaKnown RBP12.71□□□□□ -0.37
SHANK2-203ENST00000409161 CLEC17AQ6ZS10 378 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 SPICE1Q8N0Z3 855 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 AFG1LQ8WV93 481 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 HNRNPLLQ8WVV9 542 aaKnown RBP12.71□□□□□ -0.37
SHANK2-203ENST00000409161 LGR6Q9HBX8 967 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 CLCA2Q9UQC9 943 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 ADCY10Q96PN6 1610 aa12.71□□□□□ -0.37
SHANK2-203ENST00000409161 SF3B1O75533 1304 aaKnown RBP eCLIP12.71□□□□□ -0.37
SHANK2-203ENST00000409161 O00370 1275 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.38
SHANK2-203ENST00000409161 RRM2P31350 389 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 TPI1P60174 286 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 HSPBP1Q9NZL4 362 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 BBOX1O75936 387 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 MLNP12872 115 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 TRIM65Q6PJ69 517 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 ZNF589Q86UQ0 364 aaPredicted RBP12.71□□□□□ -0.38
SHANK2-203ENST00000409161 CCDC60Q8IWA6 550 aaPredicted RBP12.71□□□□□ -0.38
SHANK2-203ENST00000409161 SAMD9LQ8IVG5 1584 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 SMIM31A0A1B0GVY4 71 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 SNRPAP09012 282 aaKnown RBP12.71□□□□□ -0.38
SHANK2-203ENST00000409161 LRRC14Q15048 493 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 SYTL3Q4VX76 610 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 GSPT2Q8IYD1 628 aaKnown RBP12.71□□□□□ -0.38
SHANK2-203ENST00000409161 JADE3Q92613 823 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 RMND5BQ96G75 393 aaPredicted RBP12.71□□□□□ -0.38
SHANK2-203ENST00000409161 MED15Q96RN5 788 aa12.71□□□□□ -0.38
SHANK2-203ENST00000409161 SNRPFP62306 86 aaKnown RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 INAQ16352 499 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 SLC27A3Q5K4L6 730 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 CATSPER4Q7RTX7 472 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 UBAP1Q9NZ09 502 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 BIRC5O15392 142 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 MTRF1O75570 445 aaKnown RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 PTPN12Q05209 780 aaKnown RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 XPO6Q96QU8 1125 aaKnown RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 RHBDL2Q9NX52 303 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 PAK5Q9P286 719 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 PRDM15P57071 1507 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 ABCA8O94911 1581 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 CAND2O75155 1236 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 FNTAP49354 379 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 SCNN1DP51172 638 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 PTK7Q13308 1070 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 KRT78Q8N1N4 520 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 SCFD2Q8WU76 684 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 EXOSC4Q9NPD3 245 aaKnown RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 DFFAO00273 331 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 ATPAF2Q8N5M1 289 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 GLMNQ92990 594 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 CARD9Q9H257 536 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 ZSWIM5Q9P217 1185 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 NEU2Q9Y3R4 380 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 TBX22Q9Y458 520 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 CROCCQ5TZA2 2017 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 PRR23AA6NEV1 266 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 CENPCQ03188 943 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 RCN1Q15293 331 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 SUGP1Q8IWZ8 645 aaKnown RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 PIK3R5Q8WYR1 880 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 MAP3K20Q9NYL2 800 aaKnown RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 IGF2BP3O00425 579 aaKnown RBP eCLIP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 NDUFS3O75489 264 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 ASNSP08243 561 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 GCLMP48507 274 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 KRT73Q86Y46 540 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 USP13Q92995 863 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 C11orf70Q9BRQ4 267 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 RWDD3Q9Y3V2 267 aa12.7□□□□□ -0.38
SHANK2-203ENST00000409161 DNALI1O14645 258 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 ATP5BP06576 529 aaKnown RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 IL6STP40189 918 aaPredicted RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 IREB2P48200 963 aaKnown RBP12.7□□□□□ -0.38
SHANK2-203ENST00000409161 PRKCQQ04759 706 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms