RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 TGM5O43548 720 aa19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 PRR29P0C7W0 189 aa19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 SSTR3P32745 418 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 STK4Q13043 487 aa19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 KANK3Q6NY19 840 aa19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 ANKS3Q6ZW76 656 aa19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 BRSK2Q8IWQ3 736 aa19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 ADHFE1Q8IWW8 467 aa19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 SUSD6Q92537 303 aa19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 CCDC47Q96A33 483 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 SUSD3Q96L08 255 aa19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 MAN1C1Q9NR34 630 aa19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 RBAKQ9NYW8 714 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 HSPBP1Q9NZL4 362 aa19.45■□□□□ 0.7
PDLIM2-206ENST00000409141 SYN3O14994 580 aa19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 TGFB1I1O43294 461 aa19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 C1RP00736 705 aa19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 CBX2Q14781 532 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 BMT2Q1RMZ1 405 aa19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 LILRA6Q6PI73 481 aa19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 TMC5Q6UXY8 1006 aa19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 HS2ST1Q7LGA3 356 aa19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 FMR1NBQ8N0W7 255 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 GJD3Q8N144 294 aa19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 SFXN1Q9H9B4 322 aa19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 AGPAT3Q9NRZ7 376 aa19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 CHMP5Q9NZZ3 219 aa19.44■□□□□ 0.7
PDLIM2-206ENST00000409141 PDCD11Q14690 1871 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 CLIC2O15247 247 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 WEE2P0C1S8 567 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 OR1D2P34982 312 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 SNRPFP62306 86 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 ZP2Q05996 745 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 DPYDQ12882 1025 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 KNOP1Q1ED39 458 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 ATAT1Q5SQI0 421 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 VARS2Q5ST30 1063 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 C9orf57Q5W0N0 161 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 NT5DC4Q86YG4 428 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 HDAC7Q8WUI4 952 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 RIPOR3Q96MK2 946 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 POP1Q99575 1024 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 PHF7Q9BWX1 381 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 PLEKHA4Q9H4M7 779 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 KIAA1586Q9HCI6 787 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 CD320Q9NPF0 282 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 DPP3Q9NY33 737 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 MTRRQ9UBK8 725 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 BACE2Q9Y5Z0 518 aa19.43■□□□□ 0.7
PDLIM2-206ENST00000409141 ZNF233A6NK53 670 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 PPEF2O14830 753 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 ADAM12O43184 909 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 MTHFRP42898 656 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 TFAMQ00059 246 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 DSTYKQ6XUX3 929 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 EFCAB13Q8IY85 973 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 KIAA0895Q8NCT3 520 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 KREMEN2Q8NCW0 462 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 APPL2Q8NEU8 664 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 CACTINQ8WUQ7 758 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 PDE11AQ9HCR9 933 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 CGNQ9P2M7 1197 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 CDH22Q9UJ99 828 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 PCDHB8Q9UN66 801 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 CDY1Q9Y6F8 540 aa19.42■□□□□ 0.7
PDLIM2-206ENST00000409141 H7C4K7 107 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 PIRO00625 290 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 CYP2J2P51589 502 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 WNT7BP56706 349 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 FAM160A1Q05DH4 1040 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 RAB33AQ14088 237 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 CBWD2Q8IUF1 395 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 RDH13Q8NBN7 331 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 ENGASEQ8NFI3 743 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 RPGRIP1Q96KN7 1286 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 NECTIN4Q96NY8 510 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 VWA8A3KMH1 1905 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 CCDC195A0A1B0GUA6 201 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 ANO9A1A5B4 782 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 C19orf67A6NJJ6 358 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 M0QZQ0 153 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 RHOBTB3O94955 611 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 PAX3P23760 479 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 LILRA4P59901 499 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 SNW1Q13573 536 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 MRPL58Q14197 206 aaKnown RBP19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 RSPO2Q6UXX9 243 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 GPR149Q86SP6 731 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 XXYLT1Q8NBI6 393 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 GOLGA5Q8TBA6 731 aa19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 TIMM13Q9Y5L4 95 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-206ENST00000409141 RFPL2O75678 378 aa19.4■□□□□ 0.7
PDLIM2-206ENST00000409141 AARSP49588 968 aaKnown RBP eCLIP19.4■□□□□ 0.7
PDLIM2-206ENST00000409141 ARPP19P56211 112 aa19.4■□□□□ 0.7
PDLIM2-206ENST00000409141 SURF1Q15526 300 aa19.4■□□□□ 0.7
PDLIM2-206ENST00000409141 CTXN3Q4LDR2 81 aa19.4■□□□□ 0.7
PDLIM2-206ENST00000409141 CMASQ8NFW8 434 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-206ENST00000409141 FEZF2Q8TBJ5 459 aa19.4■□□□□ 0.7
PDLIM2-206ENST00000409141 SPTLC1O15269 473 aa19.39■□□□□ 0.69
PDLIM2-206ENST00000409141 KIF20AO95235 890 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms