RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 HEMGNQ9BXL5 484 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 NFKBIZQ9BYH8 718 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 UBE2OQ9C0C9 1292 aaKnown RBP5.3□□□□□ -1.56
SCN3A-203ENST00000409101 NIF3L1Q9GZT8 377 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 ATXN3LQ9H3M9 355 aa5.3□□□□□ -1.56
SCN3A-203ENST00000409101 LRRC53A6NM62 1247 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 MIF4GDA9UHW6 222 aaKnown RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 AP3B1O00203 1094 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 HGSO14964 777 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 HLA-DRAP01903 254 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 RPA1P27694 616 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 SREBF1P36956 1147 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 CDR2Q01850 454 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 GUCY2DQ02846 1103 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 PPARDQ03181 441 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 PRAMEF19Q5SWL8 479 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 FAM171A1Q5VUB5 890 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 CCDC149Q6ZUS6 474 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 UBA3Q8TBC4 463 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 RIN2Q8WYP3 895 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 PABPC5Q96DU9 382 aaKnown RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 AGPAT1Q99943 283 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 TARS2Q9BW92 718 aaKnown RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 MRIQ9BWK5 157 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 NCKAP1Q9Y2A7 1128 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 PCDHB5Q9Y5E4 795 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 ADGRB1O14514 1584 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 ARHGAP42A6NI28 874 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 LGALS16A8MUM7 142 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 ZNF197O14709 1029 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 NDUFS2O75306 463 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 TOM1L1O75674 476 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 PGK1P00558 417 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 MOXD1Q6UVY6 613 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 C15orf52Q6ZUT6 534 aaKnown RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 KDELC2Q7Z4H8 507 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 CATSPER3Q86XQ3 398 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 TNS4Q8IZW8 715 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 MORC4Q8TE76 937 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 RNF25Q96BH1 459 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 SDCCAG3Q96C92 435 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 SLC28A3Q9HAS3 691 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 TMEM8AQ9HCN3 771 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 PLA2G4CQ9UP65 541 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 ADCY6O43306 1168 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 LZTS3O60299 673 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 GNRH1P01148 92 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 FTLP02792 175 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 SERPIND1P05546 499 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 VCLP18206 1134 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 IFNA8P32881 189 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 FLT3LGP49771 235 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 PLTPP55058 493 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 MRPS6P82932 125 aaKnown RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 TWF1Q12792 350 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 PTPN21Q16825 1174 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 ADCK2Q7Z695 626 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 CDR2LQ86X02 465 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 USP33Q8TEY7 942 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 DDI1Q8WTU0 396 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 BHMTQ93088 406 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 RNPC3Q96LT9 517 aaKnown RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 C7orf25Q9BPX7 421 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 SPATA16Q9BXB7 569 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 FTHL17Q9BXU8 183 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 NMRK2Q9NPI5 230 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 MED1Q15648 1581 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 MYMKA6NI61 221 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 OGTO15294 1046 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 TBC1D12O60347 775 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 TOMM70O94826 608 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 TTC4O95801 387 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 PDGFRAP16234 1089 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 ETFBP38117 255 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 EIF2B5Q13144 721 aaKnown RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 ZC2HC1CQ53FD0 456 aaPredicted RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 MAP3K21Q5TCX8 1036 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 LRRC8AQ8IWT6 810 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 RHOT1Q8IXI2 618 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 GPT2Q8TD30 523 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 RSAD1Q9HA92 442 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 TLR8Q9NR97 1041 aaKnown RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 KRT82Q9NSB4 513 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 ADAMTS1Q9UHI8 967 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 ARHGAP10A1A4S6 786 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 FGBP02675 491 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 NOP14P78316 857 aaKnown RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 LBRQ14739 615 aaKnown RBP5.29□□□□□ -1.56
SCN3A-203ENST00000409101 CEP68Q76N32 757 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 PID1Q7Z2X4 250 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 VSTM4Q8IW00 320 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 OR6P1Q8NGX9 317 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 FAM71BQ8TC56 605 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 UROC1Q96N76 676 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 SCUBE2Q9NQ36 999 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 SNTG2Q9NY99 539 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 CALCOCO1Q9P1Z2 691 aa5.29□□□□□ -1.56
SCN3A-203ENST00000409101 CFAP99D6REC4 459 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 GOLGA8KD6RF30 607 aa5.28□□□□□ -1.56
SCN3A-203ENST00000409101 ENC1O14682 589 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms