RNA–Protein interactions for RNA: ENST00000408749.1

RNU6ATAC-201, Transcript of RNA, U6atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU6ATAC, Length 126 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC-201ENST00000408749 MXD4Q14582 209 aaPredicted RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 WWC2Q6AWC2 1192 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ANO7Q6IWH7 933 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ZNF280DQ6N043 979 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 CC2D1AQ6P1N0 951 aaPredicted RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 SLC27A1Q6PCB7 646 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 TOGARAM2Q6ZUX3 1019 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ARMCX6Q7L4S7 300 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 GPR155Q7Z3F1 870 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 APBB1IPQ7Z5R6 666 aaPredicted RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 TTC30AQ86WT1 665 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 KSR1Q8IVT5 923 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 NAXDQ8IW45 347 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 REXO1Q8N1G1 1221 aaKnown RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 CPA6Q8N4T0 437 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 SRBD1Q8N5C6 995 aaKnown RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 MINDY1Q8N5J2 469 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 PDCD7Q8N8D1 485 aaKnown RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 RPLP0P6Q8NHW5 317 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 BICD2Q8TD16 824 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 WHAMMQ8TF30 809 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 RABGGTAQ92696 567 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 NXPE2Q96DL1 559 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 CNOT6LQ96LI5 555 aaKnown RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ZSWIM3Q96MP5 696 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ADPGKQ9BRR6 497 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 MTA3Q9BTC8 594 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 EIF2AQ9BY44 585 aaKnown RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 NXF3Q9H4D5 531 aaKnown RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 C6orf50Q9HD87 102 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 POLMQ9NP87 494 aaPredicted RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 RBM28Q9NW13 759 aaKnown RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 MIOSQ9NXC5 875 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 BCCIPQ9P287 314 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 SUSD2Q9UGT4 822 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 HES2Q9Y543 173 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 SLC12A7Q9Y666 1083 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 HELZ2Q9BYK8 2649 aaKnown RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 KIAA1549LQ6ZVL6 1849 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 TNRC6BQ9UPQ9 1833 aaKnown RBP4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 TENM4Q6N022 2769 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 SHROOM3Q8TF72 1996 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 BPTFQ12830 3046 aa4.27□□□□□ -1.73
RNU6ATAC-201ENST00000408749 FREM2Q5SZK8 3169 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 hCG_1642624A0A1W2PR95 340 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 A0A1W2PRU2 124 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ERVH48-1M5A8F1 160 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ARHGAP33O14559 1287 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 SYN3O14994 580 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 N4BP3O15049 544 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ZBTB24O43167 697 aaPredicted RBP4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 B3GAT3O94766 335 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ABLIM3O94929 683 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 WISP1O95388 367 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 EGFP01133 1207 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 SERPINF2P08697 491 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 HLA-EP13747 358 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 GNSP15586 552 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 GJA1P17302 382 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 TKTP29401 623 aaKnown RBP4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 GNA11P29992 359 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 CCR2P41597 374 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 IL12RB1P42701 662 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ALDH1A3P47895 512 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 PSMC5P62195 406 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 CYP4F3Q08477 520 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 BFSP1Q12934 665 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 NR1H3Q13133 447 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 RUNX3Q13761 415 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 VEPH1Q14D04 833 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 EMC2Q15006 297 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 TAF12Q16514 161 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 UGCGQ16739 394 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 PREPLQ4J6C6 727 aaPredicted RBP4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 GPR158Q5T848 1215 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ANKRD45Q5TZF3 282 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 JAKMIP3Q5VZ66 844 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 SLC8B1Q6J4K2 584 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 FSTL4Q6MZW2 842 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 PKN3Q6P5Z2 889 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 SLC36A4Q6YBV0 504 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 TMTC3Q6ZXV5 915 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 OTUD6AQ7L8S5 288 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ITIH5Q86UX2 942 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ARID3BQ8IVW6 561 aaPredicted RBP4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 PLEKHM2Q8IWE5 1019 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 HS6ST3Q8IZP7 471 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 CMTR1Q8N1G2 835 aaKnown RBP4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 CCDC82Q8N4S0 544 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 FAM181AQ8N9Y4 354 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 PRPF31Q8WWY3 499 aaKnown RBP4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 RUFY2Q8WXA3 655 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 DDX27Q96GQ7 796 aaKnown RBP4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 CPB2Q96IY4 423 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 ZFYVE19Q96K21 471 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 TMEM87BQ96K49 555 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 CEP170P1Q96L14 293 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 TBC1D32Q96NH3 1257 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 MTRQ99707 1265 aa4.26□□□□□ -1.73
RNU6ATAC-201ENST00000408749 CDC6Q99741 560 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms