RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 CASP4P49662 377 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 CYP2J2P51589 502 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 TNNC1P63316 161 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 GTF2BQ00403 316 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 ARID5AQ03989 594 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 PLCB4Q15147 1175 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 RPS6KA1Q15418 735 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 MEI1Q5TIA1 1274 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 XXYLT1Q8NBI6 393 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 NOA1Q8NC60 698 aaKnown RBP13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 SPATA4Q8NEY3 305 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 FAM71BQ8TC56 605 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 ATP8B4Q8TF62 1192 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 FIZ1Q96SL8 496 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 NRBP2Q9NSY0 501 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 NAGPAQ9UK23 515 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 TRPC6Q9Y210 931 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 MYH9P35579 1960 aaKnown RBP13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 HBP1O60381 514 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 SRGAP2O75044 1071 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 PALMO75781 387 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 CSPG5O95196 566 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 OATP04181 439 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 SMIM10L2AP0DMW4 78 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 SMIM10L2BP0DMW5 78 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 TNFAIP3P21580 790 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 OAS2P29728 719 aaKnown RBP13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 NOP2P46087 812 aaKnown RBP13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 VAMP7P51809 220 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 PTPN5P54829 565 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 PRKCEQ02156 737 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 PTK2Q05397 1052 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 CASP8Q14790 479 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 PPP2R5EQ16537 467 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 ZC2HC1CQ53FD0 456 aaPredicted RBP13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 XKR9Q5GH70 373 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 XKR3Q5GH77 459 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 ZNF618Q5T7W0 954 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 IER5LQ5T953 404 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 CCNI2Q6ZMN8 369 aaPredicted RBP13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 ZNF571Q7Z3V5 609 aaPredicted RBP13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 IFT20Q8IY31 132 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 MCPH1Q8NEM0 835 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 PRSS33Q8NF86 280 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 BBXQ8WY36 941 aaPredicted RBP13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 PBXIP1Q96AQ6 731 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 FAM167AQ96KS9 214 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 YME1L1Q96TA2 773 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 NSUN3Q9H649 340 aaKnown RBP13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 SIX2Q9NPC8 291 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 SETD4Q9NVD3 440 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 WRAP73Q9P2S5 460 aaPredicted RBP13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 APEX2Q9UBZ4 518 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 DNAJC12Q9UKB3 198 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 TFR2Q9UP52 801 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 USP20Q9Y2K6 914 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 SIP14410 1827 aa13.87□□□□□ -0.19
SMARCB1-203ENST00000407082 CCDC66A2RUB6 948 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 KIAA0391O15091 583 aaKnown RBP13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 BUB1O43683 1085 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 INSRRP14616 1297 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 KLRC1P26715 233 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 NCKAP1LP55160 1127 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 MCCD1P59942 119 aaPredicted RBP13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 PPFIA1Q13136 1202 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 MAPK7Q13164 816 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 NNTQ13423 1086 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 DPY19L2P1Q6NXN4 242 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 C8orf74Q6P047 294 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 HAUS6Q7Z4H7 955 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 RPAINQ86UA6 219 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 SESTD1Q86VW0 696 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 RNF135Q8IUD6 432 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 EIF1ADQ8N9N8 165 aaKnown RBP13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 SPIRE2Q8WWL2 714 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 TLR10Q9BXR5 811 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 INTS2Q9H0H0 1204 aaKnown RBP13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 IGFLR1Q9H665 355 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 PSD3Q9NYI0 1048 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 GTF2IRD1Q9UHL9 959 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 NRCAMQ92823 1304 aa13.86□□□□□ -0.19
SMARCB1-203ENST00000407082 ZNF318Q5VUA4 2279 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 MYO7AQ13402 2215 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 C17orf102A2RUQ5 167 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 RRN3P2A6NIE6 340 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 H3BNC9 293 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 TULP1O00294 542 aaPredicted RBP13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 ZBTB39O15060 712 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 GFRA3O60609 400 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 SASH3O75995 380 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 STBD1O95210 358 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 GNAT1P11488 350 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 GTF2H1P32780 548 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 TNNT3P45378 269 aaPredicted RBP13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 IGBP1P78318 339 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 ZNF200P98182 395 aaPredicted RBP13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 DMP1Q13316 513 aaPredicted RBP13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 DRAP1Q14919 205 aaPredicted RBP13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 GRIK4Q16099 956 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms