RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.18□□□□□ -1.42
HDAC9-203ENST00000406072 ADSSL1Q8N142 457 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 PPM1KQ8N3J5 372 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 SLC25A41Q8N5S1 370 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 TTC8Q8TAM2 541 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 CALML6Q8TD86 181 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 USP33Q8TEY7 942 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 C1orf54Q8WWF1 131 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 ZNF570Q96NI8 536 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 TLR10Q9BXR5 811 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 OSBPL8Q9BZF1 889 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 GRIP2Q9C0E4 1043 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 MYLK2Q9H1R3 596 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 NMRK1Q9NWW6 199 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 SLC5A4Q9NY91 659 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 GCNT4Q9P109 453 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 SMG5Q9UPR3 1016 aaKnown RBP6.18□□□□□ -1.42
HDAC9-203ENST00000406072 DNM3Q9UQ16 869 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 HPSEQ9Y251 543 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 IVNS1ABPQ9Y6Y0 642 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 LOC100653049A0A140TA62 436 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 IQANK1A0A1B0GTG1 560 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 POTEFA5A3E0 1075 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 UNCXA6NJT0 531 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 E9PMD0 336 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 PPIP5K2O43314 1243 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 PEX14O75381 377 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 SERPINI2O75830 405 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 KRT34O76011 436 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 KRT36O76013 467 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 TJP3O95049 919 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 LDHAP00338 332 aaKnown RBP6.18□□□□□ -1.42
HDAC9-203ENST00000406072 GOLGA8HP0CJ92 632 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 KCNJ1P48048 391 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 C21orf59P57076 290 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 CACNB1Q02641 598 aaPredicted RBP6.18□□□□□ -1.42
HDAC9-203ENST00000406072 RPS6KA2Q15349 733 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 OASLQ15646 514 aaKnown RBP6.18□□□□□ -1.42
HDAC9-203ENST00000406072 APOBEC3HQ6NTF7 200 aaKnown RBP6.18□□□□□ -1.42
HDAC9-203ENST00000406072 MKNK1Q9BUB5 465 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 DNAI2Q9GZS0 605 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 UPF3AQ9H1J1 476 aaKnown RBP6.18□□□□□ -1.42
HDAC9-203ENST00000406072 GDF3Q9NR23 364 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 SELENONQ9NZV5 590 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 WDR37Q9Y2I8 494 aa6.18□□□□□ -1.42
HDAC9-203ENST00000406072 FLT1P17948 1338 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 SMIM31A0A1B0GVY4 71 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 SMCO2A6NFE2 343 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 YDJCA8MPS7 323 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 GOLGA8SH3BPF8 625 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 GOLGA8MH3BSY2 632 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 IPO5O00410 1097 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 LPXNO60711 386 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 KRT38O76015 456 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 APOA1P02647 267 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 CCDC166P0CW27 439 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 FAM47AQ5JRC9 791 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 TTBK2Q6IQ55 1244 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 RINT1Q6NUQ1 792 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 TATDN1Q6P1N9 297 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 TMC3Q7Z5M5 1100 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 LRRC6Q86X45 466 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 DGKHQ86XP1 1220 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 CATSPER3Q86XQ3 398 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 CROCCP3Q8IVE0 287 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 RHOT2Q8IXI1 618 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 EXOC8Q8IYI6 725 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 REXO1Q8N1G1 1221 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 SDCCAG3Q96C92 435 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 ZFYVE19Q96K21 471 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 BTBD6Q96KE9 485 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 MAGEB18Q96M61 343 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 KLHL4Q9C0H6 718 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 CCDC90BQ9GZT6 254 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 SENP1Q9P0U3 644 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 SPATA7Q9P0W8 599 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 MTO1Q9Y2Z2 717 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 MYH4Q9Y623 1939 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 ADCY6O43306 1168 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 XPOTO43592 962 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 CBFA2T3O75081 653 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 PSMG1O95456 288 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 POTEIP0CG38 1075 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 PYGMP11217 842 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 KRT3P12035 628 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 KRT4P19013 534 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 NFKBIAP25963 317 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 DAB2P98082 770 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 CAV1Q03135 178 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 TRAF7Q6Q0C0 670 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 LVRNQ6Q4G3 990 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 GPR141Q7Z602 305 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 PDIK1LQ8N165 341 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 FLCNQ8NFG4 579 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 RFWD2Q8NHY2 731 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 ATXN2LQ8WWM7 1075 aaKnown RBP6.17□□□□□ -1.42
HDAC9-203ENST00000406072 MTMR8Q96EF0 704 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 SERPINB12Q96P63 405 aa6.17□□□□□ -1.42
HDAC9-203ENST00000406072 KLF6Q99612 283 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms