RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 PSAPP07602 524 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 NR3C2P08235 984 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CFHP08603 1231 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 TMEM191BP0C7N4 346 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 DLATP10515 647 aaKnown RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 CCNB1P14635 433 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 RRM1P23921 792 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 RPS12P25398 132 aaKnown RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 USP8P40818 1118 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 KCNJ1P48048 391 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 ITGA8P53708 1063 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 TAS2R40P59535 323 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 COPS2P61201 443 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 ELF3P78545 371 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 CXCL9Q07325 125 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 BNIP1Q12981 228 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 MKRN3Q13064 507 aaKnown RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 ZNF268Q14587 947 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 TLDC1Q6P9B6 456 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CYB5D1Q6P9G0 228 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 TAOK1Q7L7X3 1001 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CCDC50Q8IVM0 306 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 FAXDC2Q96IV6 333 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CGRRF1Q99675 332 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 PRMT1Q99873 361 aaKnown RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 KIFC3Q9BVG8 833 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 PLVAPQ9BX97 442 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 TRIM7Q9C029 511 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 ATP6V0A4Q9HBG4 840 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 SSU72Q9NP77 194 aaKnown RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 CYLDQ9NQC7 956 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 PCDHGC3Q9UN70 934 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 EFR3BQ9Y2G0 817 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 ZBTB12Q9Y330 459 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 SBF1O95248 1867 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 HLA-DRAP01903 254 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 SUPT20HL2P0C7V6 817 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 EIF2AK2P19525 551 aaKnown RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 MMP8P22894 467 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 MAPK4P31152 587 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 SKIV2L2P42285 1042 aaKnown RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 NAMPTP43490 491 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CDR1P51861 262 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 BACE1P56817 501 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 SP2Q02086 613 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 MCL1Q07820 350 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 DGKZQ13574 1117 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CUL2Q13617 745 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 OASLQ15646 514 aaKnown RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 SUPT20HL1Q3ZLR7 823 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 SGO2Q562F6 1265 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 NOL9Q5SY16 702 aaKnown RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 RNF43Q68DV7 783 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CDCA2Q69YH5 1023 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 MAEAQ7L5Y9 396 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 NLRX1Q86UT6 975 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CCDC60Q8IWA6 550 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 RHOT1Q8IXI2 618 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 PARP9Q8IXQ6 854 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CCDC105Q8IYK2 499 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CYP4X1Q8N118 509 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 C1orf54Q8WWF1 131 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 ATP6V0A1Q93050 837 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 MAGEB18Q96M61 343 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 SLITRK1Q96PX8 696 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 RPAP3Q9H6T3 665 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 UBN1Q9NPG3 1134 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 HAUS2Q9NVX0 235 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CYP39A1Q9NYL5 469 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 GABBR1Q9UBS5 961 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 MCM8Q9UJA3 840 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 ANAPC7Q9UJX3 599 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 COL4A4P53420 1690 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 CFAP73A6NFT4 308 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 TMEM110-MUSTN1A8MSY1 372 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CHUKO15111 745 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 LIASO43766 372 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 SPOPO43791 374 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 ZBED4O75132 1171 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 LSM8O95777 96 aaKnown RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 ITGBL1O95965 494 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 CLTAP09496 248 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 PROZP22891 400 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 GLRA2P23416 452 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 EDNRBP24530 442 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 TBXAS1P24557 533 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 ATP5DP30049 168 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 CCNG1P51959 295 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 AP3M2P53677 418 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 STAT4Q14765 748 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 EAPPQ56P03 285 aaPredicted RBP4.11□□□□□ -1.75
RTN4-209ENST00000405240 XKR3Q5GH77 459 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 SH3D19Q5HYK7 790 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 ARHGEF16Q5VV41 709 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 SLFN12LQ6IEE8 588 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 TRPM8Q7Z2W7 1104 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 RCOR2Q8IZ40 523 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 WDTC1Q8N5D0 677 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 ALLCQ8N6M5 410 aa4.11□□□□□ -1.75
RTN4-209ENST00000405240 ASAP3Q8TDY4 903 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms