RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 LACTBL1A8MY62 500 aa22.57■■□□□ 1.2
TPM1-208ENST00000404484 FOXN3O00409 490 aaPredicted RBP22.57■■□□□ 1.2
TPM1-208ENST00000404484 LRRN2O75325 713 aa22.57■■□□□ 1.2
TPM1-208ENST00000404484 SELPP16109 830 aa22.57■■□□□ 1.2
TPM1-208ENST00000404484 ANK1P16157 1881 aa22.57■■□□□ 1.2
TPM1-208ENST00000404484 YARSP54577 528 aaKnown RBP22.57■■□□□ 1.2
TPM1-208ENST00000404484 ETF1P62495 437 aaKnown RBP22.57■■□□□ 1.2
TPM1-208ENST00000404484 PTK2Q05397 1052 aa22.57■■□□□ 1.2
TPM1-208ENST00000404484 GPNMBQ14956 572 aa22.57■■□□□ 1.2
TPM1-208ENST00000404484 DEFB128Q7Z7B8 93 aa22.57■■□□□ 1.2
TPM1-208ENST00000404484 EFCAB13Q8IY85 973 aa22.57■■□□□ 1.2
TPM1-208ENST00000404484 TMEM192Q8IY95 271 aa22.57■■□□□ 1.2
TPM1-208ENST00000404484 KREMEN1Q96MU8 473 aa22.57■■□□□ 1.2
TPM1-208ENST00000404484 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.57■■□□□ 1.2
TPM1-208ENST00000404484 LZTFL1Q9NQ48 299 aa22.57■■□□□ 1.2
TPM1-208ENST00000404484 DERAQ9Y315 318 aa22.57■■□□□ 1.2
TPM1-208ENST00000404484 KRT86O43790 486 aa22.56■■□□□ 1.2
TPM1-208ENST00000404484 KIF5CO60282 957 aa22.56■■□□□ 1.2
TPM1-208ENST00000404484 NOP14P78316 857 aaKnown RBP22.56■■□□□ 1.2
TPM1-208ENST00000404484 BMS1Q14692 1282 aaKnown RBP22.56■■□□□ 1.2
TPM1-208ENST00000404484 SGSM1Q2NKQ1 1148 aa22.56■■□□□ 1.2
TPM1-208ENST00000404484 SLC10A6Q3KNW5 377 aa22.56■■□□□ 1.2
TPM1-208ENST00000404484 ZNF618Q5T7W0 954 aa22.56■■□□□ 1.2
TPM1-208ENST00000404484 ZNF571Q7Z3V5 609 aaPredicted RBP22.56■■□□□ 1.2
TPM1-208ENST00000404484 FAM228AQ86W67 206 aa22.56■■□□□ 1.2
TPM1-208ENST00000404484 FAM71AQ8IYT1 594 aa22.56■■□□□ 1.2
TPM1-208ENST00000404484 RPUSD2Q8IZ73 545 aaKnown RBP22.56■■□□□ 1.2
TPM1-208ENST00000404484 TAF4BQ92750 862 aa22.56■■□□□ 1.2
TPM1-208ENST00000404484 LRCH3Q96II8 777 aa22.56■■□□□ 1.2
TPM1-208ENST00000404484 RNPC3Q96LT9 517 aaKnown RBP22.56■■□□□ 1.2
TPM1-208ENST00000404484 PI4K2AQ9BTU6 479 aa22.56■■□□□ 1.2
TPM1-208ENST00000404484 PCDHA13Q9Y5I0 950 aa22.56■■□□□ 1.2
TPM1-208ENST00000404484 RPS6KA5O75582 802 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 ASS1P00966 412 aaKnown RBP22.55■■□□□ 1.2
TPM1-208ENST00000404484 FGBP02675 491 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 THPOP40225 353 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 MAGEA1P43355 309 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 GFPT1Q06210 699 aaPredicted RBP22.55■■□□□ 1.2
TPM1-208ENST00000404484 MGAT3Q09327 533 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 KIF5AQ12840 1032 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 TMEM132DQ14C87 1099 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 TRAF7Q6Q0C0 670 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 LRRC8DQ7L1W4 858 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 GPIHBP1Q8IV16 184 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 TATDN2Q93075 761 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 TSPAN18Q96SJ8 248 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 MYO1AQ9UBC5 1043 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 NOC2LQ9Y3T9 749 aaKnown RBP22.55■■□□□ 1.2
TPM1-208ENST00000404484 TET1Q8NFU7 2136 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 CLSTN1O94985 981 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 PNMA6AP0CW24 399 aaPredicted RBP22.55■■□□□ 1.2
TPM1-208ENST00000404484 CYP27A1Q02318 531 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 JADE1Q6IE81 842 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 PSRC1Q6PGN9 363 aaPredicted RBP22.55■■□□□ 1.2
TPM1-208ENST00000404484 KIF18AQ8NI77 898 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 FAXDC2Q96IV6 333 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 FAM84AQ96KN4 292 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.55■■□□□ 1.2
TPM1-208ENST00000404484 CHST12Q9NRB3 414 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 ADAMTS1Q9UHI8 967 aa22.55■■□□□ 1.2
TPM1-208ENST00000404484 R3HCC1Q9Y3T6 440 aaKnown RBP22.55■■□□□ 1.2
TPM1-208ENST00000404484 ATP8B3O60423 1300 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 RALGAPA2Q2PPJ7 1873 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 CITO14578 2027 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 SCN5AQ14524 2016 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 ZNF263O14978 683 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 GPR182O15218 404 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 NFICP08651 508 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 CTSHP09668 335 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 RFC2P35250 354 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 USP8P40818 1118 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 CUL2Q13617 745 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 CCDC122Q5T0U0 273 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 OTOP2Q7RTS6 562 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 KAT5Q92993 513 aa22.54■■□□□ 1.2
TPM1-208ENST00000404484 EIF2AQ9BY44 585 aaKnown RBP22.54■■□□□ 1.2
TPM1-208ENST00000404484 CHRNA1P02708 482 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 ARHGAP25P42331 645 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 BPIFB4P59827 614 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 MBTPS1Q14703 1052 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 FAM26DQ5JW98 314 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 RASIP1Q5U651 963 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 TWF2Q6IBS0 349 aaKnown RBP22.53■■□□□ 1.2
TPM1-208ENST00000404484 HACE1Q8IYU2 909 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 HERVK_113Q902F9 699 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 SNX27Q96L92 541 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 SNTG2Q9NY99 539 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 ITGA11Q9UKX5 1188 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 PAXBP1Q9Y5B6 917 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 SQORQ9Y6N5 450 aa22.53■■□□□ 1.2
TPM1-208ENST00000404484 A0A087X0T9 212 aa22.52■■□□□ 1.2
TPM1-208ENST00000404484 NBNO60934 754 aa22.52■■□□□ 1.2
TPM1-208ENST00000404484 FAM228BP0C875 321 aa22.52■■□□□ 1.2
TPM1-208ENST00000404484 ATICP31939 592 aa22.52■■□□□ 1.2
TPM1-208ENST00000404484 GNG11P61952 73 aa22.52■■□□□ 1.2
TPM1-208ENST00000404484 ZNF699Q32M78 642 aa22.52■■□□□ 1.2
TPM1-208ENST00000404484 USP38Q8NB14 1042 aa22.52■■□□□ 1.2
TPM1-208ENST00000404484 NIF3L1Q9GZT8 377 aa22.52■■□□□ 1.2
TPM1-208ENST00000404484 APOBEC3GQ9HC16 384 aaKnown RBP22.52■■□□□ 1.2
TPM1-208ENST00000404484 CXXC1Q9P0U4 656 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms