RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	LGALS2	P05162	132 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	POLR2M	P0CAP2	368 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SMIM10L2A	P0DMW4	78 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SMIM10L2B	P0DMW5	78 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	UBA1	P22314	1058 aa	Known RBP	7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	HSD17B4	P51659	736 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SMAD4	Q13485	552 aa	Known RBP	7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	NEDD9	Q14511	834 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	IMMT	Q16891	758 aa	Known RBP	7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	HSDL1	Q3SXM5	330 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	TMPRSS7	Q7RTY8	843 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	RPAIN	Q86UA6	219 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	RSPH3	Q86UC2	560 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SUGP1	Q8IWZ8	645 aa	Known RBP	7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ZNF655	Q8N720	491 aa	Predicted RBP	7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	DAGLB	Q8NCG7	672 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	TBC1D5	Q92609	795 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ANKS1A	Q92625	1134 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	HDAC8	Q9BY41	377 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	KRT23	Q9C075	422 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	KLHL25	Q9H0H3	589 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	JMJD4	Q9H9V9	463 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ST7	Q9NRC1	585 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	GFOD1	Q9NXC2	390 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ZNF451	Q9Y4E5	1061 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	PCDHA1	Q9Y5I3	950 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	NEDD4	P46934	1319 aa		7.75	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ANKRD34B	A5PLL1	514 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	WASH4P	A8MWX3	477 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	STXBP3	O00186	592 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	HIP1	O00291	1037 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	PRAMEF1	O95521	474 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	RPLP2	P05387	115 aa	Known RBP	7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	EPHX1	P07099	455 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	CD8B	P10966	210 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	NAT2	P11245	290 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ITGA4	P13612	1032 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	BMPR1A	P36894	532 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	NDUFV1	P49821	464 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ZNF143	P52747	638 aa	Predicted RBP	7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	PDE1A	P54750	535 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	GHRHR	Q02643	423 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	PGM5	Q15124	567 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SMAD2	Q15796	467 aa	Known RBP	7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	IFIT1B	Q5T764	474 aa	Known RBP	7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	TAF2	Q6P1X5	1199 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	METTL7B	Q6UX53	244 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	STOX1	Q6ZVD7	989 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ZNF589	Q86UQ0	364 aa	Predicted RBP	7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	FLCN	Q8NFG4	579 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	RILPL2	Q969X0	211 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	C16orf70	Q9BSU1	422 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	CHST7	Q9NS84	486 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	DIAPH3	Q9NSV4	1193 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SIRPG	Q9P1W8	387 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	WHRN	Q9P202	907 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	CHD7	Q9P2D1	2997 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	CD207	Q9UJ71	328 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	RNF114	Q9Y508	228 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ADGRA3	Q8IWK6	1321 aa		7.74	□□□□□ -1.17
CEACAM1-208	ENST00000403461	MUC6	Q6W4X9	2439 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SCN10A	Q9Y5Y9	1956 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ERICH2	A1L162	156 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461		B2RBV5	119 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	KLRF2	D3W0D1	207 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	C5orf67	F2Z3F1	127 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	FIBP	O43427	364 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	CSPG5	O95196	566 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	HOXA13	P31271	388 aa	Predicted RBP	7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	HOXC8	P31273	242 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	CD96	P40200	585 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ZNF445	P59923	1031 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	IKZF1	Q13422	519 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	BTG3	Q14201	252 aa	Predicted RBP	7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	CLUL1	Q15846	466 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	HERC4	Q5GLZ8	1057 aa	Predicted RBP	7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	NFXL1	Q6ZNB6	911 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	HOMER1	Q86YM7	354 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	WFDC3	Q8IUB2	231 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	ENAH	Q8N8S7	591 aa	Predicted RBP	7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	GIMAP8	Q8ND71	665 aa	Predicted RBP	7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	TNPO1	Q92973	898 aa	Known RBP	7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	CUL5	Q93034	780 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	GBP3	Q9H0R5	595 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	IRF2BPL	Q9H1B7	796 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	RNPEP	Q9H4A4	650 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SETD4	Q9NVD3	440 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SUSD2	Q9UGT4	822 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	MUTYH	Q9UIF7	546 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	DUSP13	Q9UII6	198 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	FHOD1	Q9Y613	1164 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	NRCAM	Q92823	1304 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	SALL3	Q9BXA9	1300 aa		7.73	□□□□□ -1.17
CEACAM1-208	ENST00000403461	MYO9B	Q13459	2157 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	FSD2	A1L4K1	749 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461		B4E1Z4	1266 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461		M0QZ92	97 aa		7.72	□□□□□ -1.17
CEACAM1-208	ENST00000403461	GRM6	O15303	877 aa		7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms