RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 FXR2P51116 673 aaKnown RBP eCLIP3.43□□□□□ -1.862e-7■■■■■ 31.4
KNL1-202ENST00000399668 PCSK7Q16549 785 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 IMPG1Q17R60 797 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 LONRF1Q17RB8 773 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 P3H1Q32P28 736 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 NBPF9Q3BBW0 867 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 COBLL1Q53SF7 1204 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ADSSL1Q8N142 457 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TTC13Q8NBP0 860 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 UBA3Q8TBC4 463 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 RNF217Q8TC41 542 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 BHMTQ93088 406 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 SPON2Q9BUD6 331 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 VCPKMTQ9H867 229 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 VCX3AQ9NNX9 186 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 AGAP1Q9UPQ3 857 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 ITIH6Q6UXX5 1313 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 A0A087X0T9 212 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 PDXKO00764 312 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 C2CD2LO14523 706 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 KRT37O76014 449 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 HSPA4LO95757 839 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 C6orf222P0C671 652 aaPredicted RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 FAM228BP0C875 321 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 CHRNA3P32297 505 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 MAGEA9P43362 315 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 NPEPPSP55786 919 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 SESN2P58004 480 aaPredicted RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 STX1BP61266 288 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 CAV1Q03135 178 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ARHGEF6Q15052 776 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TAF11Q15544 211 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 IZUMO3Q5VZ72 239 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 PID1Q7Z2X4 250 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 DDX42Q86XP3 938 aaKnown RBP eCLIP3.43□□□□□ -1.86
KNL1-202ENST00000399668 NUDCD3Q8IVD9 361 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 KCNV2Q8TDN2 545 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ACER1Q8TDN7 264 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ACSF2Q96CM8 615 aaPredicted RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 HPDLQ96IR7 371 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 SP110Q9HB58 689 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 SNX9Q9Y5X1 595 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 JCADQ9P266 1359 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 NEURL4Q96JN8 1562 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ROBO1Q9Y6N7 1651 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 PFASO15067 1338 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 IGSF9BQ9UPX0 1349 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 DENND4AQ7Z401 1863 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 GPR75-ASB3A0A0A6YYF3 556 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 GSTA4O15217 222 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 MAP3K7O43318 606 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 LUC7L3O95232 432 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 CTSHP09668 335 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 SDC4P31431 198 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 LSP1P33241 339 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 SEMA3FQ13275 785 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 EZH2Q15910 746 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 RNF219Q5W0B1 726 aaPredicted RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 ABCA7Q8IZY2 2146 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 CCDC33Q8N5R6 958 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 SERPINI1Q99574 410 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 MXRA8Q9BRK3 442 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 EFHD1Q9BUP0 239 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TRIM55Q9BYV6 548 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 SMARCAD1Q9H4L7 1026 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 FAM49BQ9NUQ9 324 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 KLK14Q9P0G3 267 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ZNF70Q9UC06 446 aaPredicted RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 HACL1Q9UJ83 578 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TRIM33Q9UPN9 1127 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 APOBEC2Q9Y235 224 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 FOCADQ5VW36 1801 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 PDS5AQ29RF7 1337 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 PTPRDP23468 1912 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 NEMP1O14524 444 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 DNAJC6O75061 913 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 MOCS2O96007 188 aaPredicted RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 VTNP04004 478 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TYK2P29597 1187 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 GTF2H1P32780 548 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 TAP1Q03518 808 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 KCNA1Q09470 495 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 DHX34Q14147 1143 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 SLC29A2Q14542 456 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 FASTKD1Q53R41 847 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 GLRA4Q5JXX5 417 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 LRRC31Q6UY01 552 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ADGRA1Q86SQ6 560 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 CYP2W1Q8TAV3 490 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 RAET1EQ8TD07 263 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 FBXO41Q8TF61 875 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 ZDHHC15Q96MV8 337 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 SENP7Q9BQF6 1050 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 MTMR12Q9C0I1 747 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 UNC45AQ9H3U1 944 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 TJP2Q9UDY2 1190 aa3.43□□□□□ -1.86
KNL1-202ENST00000399668 MARCOQ9UEW3 520 aaPredicted RBP3.43□□□□□ -1.86
KNL1-202ENST00000399668 MOSPD1Q9UJG1 213 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms