RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 SLC13A1Q9BZW2 595 aa15.41■□□□□ 0.06
RPRD1A-202ENST00000399022 RPAP3Q9H6T3 665 aaPredicted RBP15.41■□□□□ 0.06
RPRD1A-202ENST00000399022 PIM2Q9P1W9 311 aa15.41■□□□□ 0.06
RPRD1A-202ENST00000399022 MED1Q15648 1581 aaPredicted RBP15.41■□□□□ 0.06
RPRD1A-202ENST00000399022 NALCNQ8IZF0 1738 aa15.41■□□□□ 0.06
RPRD1A-202ENST00000399022 ATMINO43313 823 aaPredicted RBP15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 KLRC4O43908 158 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 SUPT3HO75486 399 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 AKAP3O75969 853 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 CBX6O95503 412 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 SAT1P21673 171 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 MMP14P50281 582 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 GIT2Q14161 759 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 KRT81Q14533 505 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 TAF1BQ53T94 588 aaPredicted RBP15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 STK33Q9BYT3 514 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 HSPBP1Q9NZL4 362 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 AFDNP55196 1824 aaKnown RBP15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 YWHAEP62258 255 aaKnown RBP15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 MTDHQ86UE4 582 aaKnown RBP15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 SESTD1Q86VW0 696 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 PPM1NQ8N819 430 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 MCPH1Q8NEM0 835 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 MAGEC3Q8TD91 643 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 NSUN6Q8TEA1 469 aaKnown RBP15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 PCDHAC2Q9Y5I4 1007 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 C16orf87Q6PH81 154 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 SPATA20Q8TB22 786 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 CCT6BQ92526 530 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 ZDHHC15Q96MV8 337 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 KIFC3Q9BVG8 833 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 THAP2Q9H0W7 228 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 SYNJ2BP-COX16A0A087WUM0 186 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 ARP10275 920 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 SERPINI1Q99574 410 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 COX16Q9P0S2 106 aa15.4■□□□□ 0.06
RPRD1A-202ENST00000399022 ANXA13P27216 316 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 MAGEA4P43358 317 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 CNGA3Q16281 694 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 EPC2Q52LR7 807 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 ZNF662Q6ZS27 426 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 PDZD8Q8NEN9 1154 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 TNFRSF25Q93038 417 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 DCPSQ96C86 337 aaKnown RBP15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 KCNH7Q9NS40 1196 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 AKT3Q9Y243 479 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 LZTS1Q9Y250 596 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 TTLL3Q9Y4R7 772 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 A8MUI8 341 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 LGR5O75473 907 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 PON1P27169 355 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 KLHL38Q2WGJ6 581 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 P3H1Q32P28 736 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 IZUMO2Q6UXV1 221 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 NUDCD3Q8IVD9 361 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 FAM151AQ8WW52 585 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 PCDHA10Q9Y5I2 948 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 TJP3O95049 919 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 APOEP02649 317 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 P4HA1P13674 534 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 ARSEP51690 589 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 PTENP60484 403 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 NCALDP61601 193 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 IRGCQ6NXR0 463 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 FAM43BQ6ZT52 329 aaPredicted RBP15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 SLC51AQ86UW1 340 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 IRF2BP1Q8IU81 584 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 FBXL13Q8NEE6 735 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 SCG3Q8WXD2 468 aaKnown RBP15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 MED15Q96RN5 788 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 WWP1Q9H0M0 922 aa15.39■□□□□ 0.05
RPRD1A-202ENST00000399022 DCDC2CA8MYV0 355 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 SLC16A3O15427 465 aaKnown RBP15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 PTPN4P29074 926 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 PEX5P50542 639 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 ART3Q13508 389 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 ARMC3Q5W041 872 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 ZNF384Q8TF68 577 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 ATXN2LQ8WWM7 1075 aaKnown RBP15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 CENPTQ96BT3 561 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 ADPGKQ9BRR6 497 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 GPRC5CQ9NQ84 441 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 RIPK2O43353 540 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 GMNNO75496 209 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 ACOT2P49753 483 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 DSG1Q02413 1049 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 SUPT20HL1Q3ZLR7 823 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 SLC13A5Q86YT5 568 aaPredicted RBP15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 EGFL6Q8IUX8 553 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 RNF34Q969K3 372 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 MRPL46Q9H2W6 279 aaKnown RBP15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 SPATA31A6Q5VVP1 1343 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 ZNF263O14978 683 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 MCF2LO15068 1137 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 ADAMTS3O15072 1205 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 FAM200BP0CF97 657 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 EEF1B2P24534 225 aaKnown RBP15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 FLT3P36888 993 aa15.38■□□□□ 0.05
RPRD1A-202ENST00000399022 RSBN1LQ6PCB5 846 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms