RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 LRRC34Q8IZ02 419 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 AGGF1Q8N302 714 aaeCLIP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 SLC35G2Q8TBE7 412 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 TMEM237Q96Q45 408 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 IMPG2Q9BZV3 1241 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 SMYD3Q9H7B4 428 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 TTC36A6NLP5 189 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 IPO5O00410 1097 aaKnown RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 BRAFP15056 766 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 WDR44Q5JSH3 913 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 RNF207Q6ZRF8 634 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 GLIS3Q8NEA6 775 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 TRIM56Q9BRZ2 755 aaKnown RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 DNAJC18Q9H819 358 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 TMEM8AQ9HCN3 771 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 EURLQ9NYK6 297 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 ZNF148Q9UQR1 794 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 TSC22D4Q9Y3Q8 395 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 RASA4BC9J798 803 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 FAM86B1E9PN63 330 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 RASA4O43374 803 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 FAM86B2P0C5J1 330 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 NQO1P15559 274 aaKnown RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 TPP2P29144 1249 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 ESRRGP62508 458 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 BNIP1Q12981 228 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 PPP2R5DQ14738 602 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CIAPIN1Q6FI81 312 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 POLNQ7Z5Q5 900 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 FNIP1Q8TF40 1166 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 RBM41Q96IZ5 413 aaKnown RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 PRR12Q9ULL5 1215 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 EML1O00423 815 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CFLARO15519 480 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 APOEP02649 317 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 PTGIRP43119 386 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 QARSP47897 775 aaKnown RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 PCYT1AP49585 367 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 MAP3K10Q02779 954 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 GEN1Q17RS7 908 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CASC4Q6P4E1 433 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 DDX42Q86XP3 938 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 PARD3BQ8TEW8 1205 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CKAP2Q8WWK9 683 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 RSAD2Q8WXG1 361 aa5.77□□□□□ -1.49
PTPRD-205ENST00000397611 DDX4Q9NQI0 724 aaKnown RBP5.77□□□□□ -1.49
PTPRD-205ENST00000397611 CHD4Q14839 1912 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 WTIPA6NIX2 430 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-205ENST00000397611 ASNSP08243 561 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 RXRBP28702 533 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 COILP38432 576 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-205ENST00000397611 RARRES1P49788 294 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 YARSP54577 528 aaKnown RBP5.76□□□□□ -1.49
PTPRD-205ENST00000397611 EVX2Q03828 476 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 GRIK5Q16478 980 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 BSPRYQ5W0U4 402 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 CERS5Q8N5B7 392 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 TTC13Q8NBP0 860 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 PDZD8Q8NEN9 1154 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 EXD1Q8NHP7 514 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 ATP6V0A1Q93050 837 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 LRGUKQ96M69 825 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 PPARGC1AQ9UBK2 798 aaKnown RBP5.76□□□□□ -1.49
PTPRD-205ENST00000397611 FOXN3O00409 490 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-205ENST00000397611 PSTPIP1O43586 416 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 EPHB1P54762 984 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 CDK18Q07002 472 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 C1QBPQ07021 282 aaKnown RBP5.76□□□□□ -1.49
PTPRD-205ENST00000397611 RRP1BQ14684 758 aaKnown RBP5.76□□□□□ -1.49
PTPRD-205ENST00000397611 LRRC36Q1X8D7 754 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 CCDC137Q6PK04 289 aaKnown RBP5.76□□□□□ -1.49
PTPRD-205ENST00000397611 HAUS6Q7Z4H7 955 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 POLLQ9UGP5 575 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 ZBBXA8MT70 800 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 DGAT1O75907 488 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 PROSCO94903 275 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 MKRN4PQ13434 485 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-205ENST00000397611 DCUN1D2Q6PH85 259 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 PADI6Q6TGC4 694 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 ARHGAP22Q7Z5H3 698 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 TTC39CQ8N584 583 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 ERP27Q96DN0 273 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 TRIM55Q9BYV6 548 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 MMADHCQ9H3L0 296 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-205ENST00000397611 FGFR1OP2Q9NVK5 253 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 COL16A1Q07092 1604 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-205ENST00000397611 SUPT3HO75486 399 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 GMNNO75496 209 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 PIGRP01833 764 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 MT-ND3P03897 115 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 IVDP26440 423 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 CASP5P51878 434 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 TAP1Q03518 808 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 UBE2SQ16763 222 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 MIGA2Q7L4E1 593 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 HOMEZQ8IX15 550 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 DAW1Q8N136 415 aa5.76□□□□□ -1.49
PTPRD-205ENST00000397611 NAF1Q96HR8 494 aaKnown RBP5.76□□□□□ -1.49
PTPRD-205ENST00000397611 L3MBTL1Q9Y468 752 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms