RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 GSDMDP57764 484 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 GOLGA8FQ08AF8 430 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 GOLGA8DPQ0D2H9 430 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 BIRC3Q13489 604 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 ARID5BQ14865 1188 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 CCDC85BQ15834 202 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 ZBTB6Q15916 424 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 SCARA3Q6AZY7 606 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 AGMOQ6ZNB7 445 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 TRAPPC11Q7Z392 1133 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 ZNF598Q86UK7 904 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 ECHDC2Q86YB7 292 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 HACE1Q8IYU2 909 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 TC2NQ8N9U0 490 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 ANKRD36BP1Q96IX9 119 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 EDEM3Q9BZQ6 932 aa18.26■□□□□ 0.51
TSPAN4-205ENST00000397406 XIRP2A4UGR9 3374 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 TLL1O43897 1013 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 MFAP3LO75121 409 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 TNNC2P02585 160 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 KCNE1P15382 129 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 FAM189BP81408 668 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 SLC24A5Q71RS6 500 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 C1orf127Q8N9H9 656 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 CXorf38Q8TB03 319 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 CACTINQ8WUQ7 758 aaKnown RBP18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 LPPQ93052 612 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 KIF12Q96FN5 646 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 TSPAN18Q96SJ8 248 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 C1orf112Q9NSG2 853 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 CEP72Q9P209 647 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 FBXL5Q9UKA1 691 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 AJAP1Q9UKB5 411 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 GIT1Q9Y2X7 761 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 TTC3P53804 2025 aa18.25■□□□□ 0.51
TSPAN4-205ENST00000397406 TRANK1O15050 2925 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 SMIM28A0A1B0GU29 152 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 AKR1B15C9JRZ8 316 aaPredicted RBP18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 CST3P01034 146 aaPredicted RBP18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 TPM1P09493 284 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 UCHL3P15374 230 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 PIK3CAP42336 1068 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 KCNJ6P48051 423 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 ADKP55263 362 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 POLR2FP61218 127 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 IKBKEQ14164 716 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 PHLDB3Q6NSJ2 640 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 FAM117BQ6P1L5 589 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 TMEM130Q8N3G9 435 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 CCDC150Q8NCX0 1101 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 BAP1Q92560 729 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 PGBD4Q96DM1 585 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 NAA15Q9BXJ9 866 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 APEX2Q9UBZ4 518 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 SIX4Q9UIU6 781 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 FHOD1Q9Y613 1164 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 MTCH2Q9Y6C9 303 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 SCN1AP35498 2009 aa18.24■□□□□ 0.51
TSPAN4-205ENST00000397406 ENPP3O14638 875 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 PTGESO14684 152 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 ZC3H11AO75152 810 aaKnown RBP eCLIP18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 PHACTR2O75167 634 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 POU3F3P20264 500 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 ZBED6P86452 979 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 NCOA4Q13772 614 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 GLRA4Q5JXX5 417 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 GJB7Q6PEY0 223 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 CNGA4Q8IV77 575 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 ARHGEF19Q8IW93 802 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 GSTCDQ8NEC7 633 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 ARNTL2Q8WYA1 636 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 ZFP42Q96MM3 310 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 PI4K2AQ9BTU6 479 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 RNF19AQ9NV58 838 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 LUC7L2Q9Y383 392 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 DAAM1Q9Y4D1 1078 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 LINC01553A4QN01 128 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 EOMESO95936 686 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 KRT9P35527 623 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 MLH1P40692 756 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 GUCY2FP51841 1108 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 IQCEQ6IPM2 695 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 C18orf25Q96B23 403 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 PPP1R10Q96QC0 940 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 GAD1Q99259 594 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 RAD9AQ99638 391 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 RSAD1Q9HA92 442 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 UBN1Q9NPG3 1134 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 NLRC4Q9NPP4 1024 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 DPP3Q9NY33 737 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 TUBGCP4Q9UGJ1 667 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 ITGA11Q9UKX5 1188 aa18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 UBQLN1Q9UMX0 589 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-205ENST00000397406 ARL5CA6NH57 179 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 INPPL1O15357 1258 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 ASS1P00966 412 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 ITGB3P05106 788 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 RFX1P22670 979 aa18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 AFF1P51825 1210 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-205ENST00000397406 MYL6P60660 151 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms