RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 DPYDQ12882 1025 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 CIPCQ9C0C6 399 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 CHST12Q9NRB3 414 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 TRIM17Q9Y577 477 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 PODXLO00592 558 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 SEC24DO94855 1032 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-208ENST00000397030 CKMP06732 381 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 ARRDC4Q8NCT1 418 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 ZC3H15Q8WU90 426 aaKnown RBP18.32■□□□□ 0.52
MCF2L-208ENST00000397030 ZFP69BQ9UJL9 534 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 NCOA4Q13772 614 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 SPASTQ9UBP0 616 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-208ENST00000397030 FAM47E-STBD1D6RA91 191 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 GYG2O15488 501 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 PDGFRAP16234 1089 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 ZNF177Q13360 481 aaPredicted RBP18.32■□□□□ 0.52
MCF2L-208ENST00000397030 C1orf146Q5VVC0 180 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 RHOT1Q8IXI2 618 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 C18orf8Q96DM3 657 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 FLT1P17948 1338 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 BFSP2Q13515 415 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 COG1Q8WTW3 980 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 FAM161BQ96MY7 647 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 CATSPERBQ9H7T0 1116 aa18.32■□□□□ 0.52
MCF2L-208ENST00000397030 GOLGA8RI6L899 631 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 WEE2P0C1S8 567 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 SPATS2Q86XZ4 545 aaKnown RBP18.31■□□□□ 0.52
MCF2L-208ENST00000397030 SPACA7Q96KW9 195 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 CNOT10Q9H9A5 744 aaKnown RBP18.31■□□□□ 0.52
MCF2L-208ENST00000397030 NMRK2Q9NPI5 230 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 KLF15Q9UIH9 416 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 CRB1P82279 1406 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 TNS3Q68CZ2 1445 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 KLRC2P26717 231 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 C6orf10Q5SRN2 563 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 LPAR1Q92633 364 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 CPB2Q96IY4 423 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 SENP7Q9BQF6 1050 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 H2AFY2Q9P0M6 372 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-208ENST00000397030 DIS3Q9Y2L1 958 aaKnown RBP18.31■□□□□ 0.52
MCF2L-208ENST00000397030 MAGEB2O15479 319 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 NR3C2P08235 984 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 ACTR2P61160 394 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 ORC1Q13415 861 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.31■□□□□ 0.52
MCF2L-208ENST00000397030 MRPS31Q92665 395 aaKnown RBP18.31■□□□□ 0.52
MCF2L-208ENST00000397030 FBXO10Q9UK96 956 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 CDC25BP30305 580 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 FAM32AQ9Y421 112 aaKnown RBP18.31■□□□□ 0.52
MCF2L-208ENST00000397030 TBKBP1A7MCY6 615 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 NDUFB10O96000 172 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 GSPT2Q8IYD1 628 aaKnown RBP18.31■□□□□ 0.52
MCF2L-208ENST00000397030 HPS3Q969F9 1004 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 ATG4CQ96DT6 458 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 ZFATQ9P243 1243 aa18.31■□□□□ 0.52
MCF2L-208ENST00000397030 GPR182O15218 404 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 BRAFP15056 766 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 ALDH6A1Q02252 535 aaKnown RBP18.3■□□□□ 0.52
MCF2L-208ENST00000397030 SFSWAPQ12872 951 aaKnown RBP18.3■□□□□ 0.52
MCF2L-208ENST00000397030 TOMM20Q15388 145 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 FOXR1Q6PIV2 292 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 AHCYL2Q96HN2 611 aaKnown RBP18.3■□□□□ 0.52
MCF2L-208ENST00000397030 H0Y3Z8 333 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 CDC16Q13042 620 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 FBXW10Q5XX13 1052 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 MIB1Q86YT6 1006 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 A0A087WUV0 522 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-208ENST00000397030 CFAP99D6REC4 459 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 PCSK1P29120 753 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 PLEKHM3Q6ZWE6 761 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 VTNP04004 478 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 TP53BP2Q13625 1128 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 POLD3Q15054 466 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-208ENST00000397030 SHCBP1Q8NEM2 672 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 DDI1Q8WTU0 396 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 HEATR9A2RTY3 570 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 SKAP2O75563 359 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-208ENST00000397030 SERPINI2O75830 405 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 CDC27P30260 824 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 RESTQ13127 1097 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 LRRC23Q53EV4 343 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-208ENST00000397030 C17orf80Q9BSJ5 609 aa18.3■□□□□ 0.52
MCF2L-208ENST00000397030 DMAP1Q9NPF5 467 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-208ENST00000397030 DCTN3O75935 186 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 MKRN4PQ13434 485 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-208ENST00000397030 TCEA2Q15560 299 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 PDXDC1Q6P996 788 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 VSTM4Q8IW00 320 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 COPS7BQ9H9Q2 264 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-208ENST00000397030 TUFT1Q9NNX1 390 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 C20orf96Q9NUD7 363 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-208ENST00000397030 NDOR1Q9UHB4 597 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 H2AFYO75367 372 aaKnown RBP18.29■□□□□ 0.52
MCF2L-208ENST00000397030 FKBP9O95302 570 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 MMEP08473 750 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 MLNP12872 115 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 ATP1A3P13637 1013 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 NR1D1P20393 614 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 CUL3Q13618 768 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms