RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 CNTN3Q9P232 1028 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 PRKAG2Q9UGJ0 569 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 SIK3Q9Y2K2 1263 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 C2CD2Q9Y426 696 aa15.98■□□□□ 0.15
TM9SF1-202ENST00000396854 A0A1W2PQJ5 194 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 ITGA4P13612 1032 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 TNNI1P19237 187 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 AKAP5P24588 427 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 GCLMP48507 274 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 MXI1P50539 228 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 BEND6Q5SZJ8 279 aaPredicted RBP15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 ZNF516Q92618 1163 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 PGBD4Q96DM1 585 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 FAM212AQ96EL1 285 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 APOL6Q9BWW8 343 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 TMEM117Q9H0C3 514 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 MYO6Q9UM54 1294 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 GIT1Q9Y2X7 761 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 DERAQ9Y315 318 aa15.97■□□□□ 0.15
TM9SF1-202ENST00000396854 CTAGE15A4D2H0 777 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 ENPP3O14638 875 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 ERLIN1O75477 346 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 EOMESO95936 686 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 C4BPAP04003 597 aaKnown RBP15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 TUBBP07437 444 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 CTAGE8P0CG41 777 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 CSF2RAP15509 400 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 TSR1Q2NL82 804 aaKnown RBP15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 ZACNQ401N2 412 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 KRT39Q6A163 491 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 WDR59Q6PJI9 974 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 AGMOQ6ZNB7 445 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 CTAGE6Q86UF2 777 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 CTAGE4Q8IX94 777 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 C7orf61Q8IZ16 206 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 PNKPQ96T60 521 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 ELAC1Q9H777 363 aaKnown RBP15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 PARP2Q9UGN5 583 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 COQ4Q9Y3A0 265 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 MEIS3P2A8K0S8 358 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 POLR3GO15318 223 aaPredicted RBP15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 NFICP08651 508 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 KCNE1P15382 129 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 MYL7Q01449 175 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 LMBRD2Q68DH5 695 aaPredicted RBP15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 JADE1Q6IE81 842 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 SV2AQ7L0J3 742 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 RPUSD2Q8IZ73 545 aaKnown RBP15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 TNS4Q8IZW8 715 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 OR5B17Q8NGF7 314 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 MMRN2Q9H8L6 949 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 UBN1Q9NPG3 1134 aa15.96■□□□□ 0.15
TM9SF1-202ENST00000396854 KCNMA1Q12791 1236 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 DUOXA2Q1HG44 320 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 TDRD10Q5VZ19 366 aaKnown RBP15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 TRAPPC11Q7Z392 1133 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 LPPQ93052 612 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 CXCL16Q9H2A7 254 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 PTPRSQ13332 1948 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 FNDC1Q4ZHG4 1894 aaPredicted RBP15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 INPPL1O15357 1258 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 EVI5O60447 810 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 TMEM191BP0C7N4 346 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 KRT83P78385 493 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 CETN1Q12798 172 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 IKBKEQ14164 716 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 TMEM132DQ14C87 1099 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 ZBTB6Q15916 424 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 EPC2Q52LR7 807 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 GBP6Q6ZN66 633 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 ANKRD36BP1Q96IX9 119 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 ZMAT2Q96NC0 199 aaKnown RBP15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 MTMR12Q9C0I1 747 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 RSAD1Q9HA92 442 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 IL23AQ9NPF7 189 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 TMEM161AQ9NX61 479 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 KLK14Q9P0G3 267 aa15.95■□□□□ 0.14
TM9SF1-202ENST00000396854 TRIM21P19474 475 aaKnown RBP15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 KLK7P49862 253 aa15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 ZBED6P86452 979 aa15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 TFAMQ00059 246 aaKnown RBP15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 PPIGQ13427 754 aaKnown RBP eCLIP15.94■□□□□ 0.144e-8■□□□□ 9.1
TM9SF1-202ENST00000396854 EXOC3L4Q17RC7 722 aa15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 HDXQ7Z353 690 aa15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 CRIPAKQ8N1N5 446 aa15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 EHBP1Q8NDI1 1231 aa15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 GSTCDQ8NEC7 633 aa15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 KIF12Q96FN5 646 aa15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 GCNT4Q9P109 453 aa15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 TRIM10Q9UDY6 481 aa15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 GUCA1BQ9UMX6 200 aa15.94■□□□□ 0.14
TM9SF1-202ENST00000396854 SMIM28A0A1B0GU29 152 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 ABHD14A-ACY1A0A1B0GW23 586 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 PTGESO14684 152 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 EFCAB14O75071 495 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 TNNC2P02585 160 aa15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 CYLC1P35663 651 aaPredicted RBP15.93■□□□□ 0.14
TM9SF1-202ENST00000396854 MLH1P40692 756 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms