RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 ITGB3P05106 788 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 TRIM49P0CI25 452 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 TRIM49CP0CI26 452 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 POLR2BP30876 1174 aaKnown RBP17.72■□□□□ 0.43
AP1S3-202ENST00000396653 AARSP49588 968 aaKnown RBP eCLIP17.72■□□□□ 0.43
AP1S3-202ENST00000396653 ZNF165P49910 485 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 RBP5P82980 135 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 CD300LGQ6UXG3 332 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 C15orf39Q6ZRI6 1047 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 IRF2BP1Q8IU81 584 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 C3orf58Q8NDZ4 430 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 SPPL3Q8TCT6 385 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 SLC35C1Q96A29 364 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 HERC2P3Q9BVR0 1158 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 CERS4Q9HA82 394 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 TMEM8AQ9HCN3 771 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 PUF60Q9UHX1 559 aaKnown RBP17.72■□□□□ 0.43
AP1S3-202ENST00000396653 SIX4Q9UIU6 781 aa17.72■□□□□ 0.43
AP1S3-202ENST00000396653 EPOPA6NHQ4 379 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 SMTNL1A8MU46 457 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 TRAPPC3O43617 180 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 STAU1O95793 577 aaKnown RBP17.71■□□□□ 0.43
AP1S3-202ENST00000396653 SOD2P04179 222 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 TAF6P49848 677 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 ZNF445P59923 1031 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 PPP3CAQ08209 521 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 NCAPHQ15003 741 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 DCAF17Q5H9S7 520 aaPredicted RBP17.71■□□□□ 0.43
AP1S3-202ENST00000396653 TCERG1LQ5VWI1 586 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 TDRD10Q5VZ19 366 aaKnown RBP17.71■□□□□ 0.43
AP1S3-202ENST00000396653 LRSAM1Q6UWE0 723 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 SV2AQ7L0J3 742 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 GPR65Q8IYL9 337 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 POF1BQ8WVV4 589 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 MAGEC2Q9UBF1 373 aaPredicted RBP17.71■□□□□ 0.43
AP1S3-202ENST00000396653 R3HCC1Q9Y3T6 440 aaKnown RBP17.71■□□□□ 0.43
AP1S3-202ENST00000396653 NUB1Q9Y5A7 615 aa17.71■□□□□ 0.43
AP1S3-202ENST00000396653 F8W810 466 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 TULP1O00294 542 aaPredicted RBP17.7■□□□□ 0.42
AP1S3-202ENST00000396653 PPEF2O14830 753 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 GRM6O15303 877 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 PMM2O15305 246 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 N4BP1O75113 896 aaKnown RBP17.7■□□□□ 0.42
AP1S3-202ENST00000396653 EEF1GP26641 437 aaKnown RBP17.7■□□□□ 0.42
AP1S3-202ENST00000396653 ATICP31939 592 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 MXI1P50539 228 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 BIRC3Q13489 604 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 SV2CQ496J9 727 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 CDKAL1Q5VV42 579 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 KRT39Q6A163 491 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 PDE12Q6L8Q7 609 aaKnown RBP17.7■□□□□ 0.42
AP1S3-202ENST00000396653 AOPEPQ8N6M6 819 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 GDPD5Q8WTR4 605 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 RABGGTAQ92696 567 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 FAM84AQ96KN4 292 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 SUSD3Q96L08 255 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 VN1R3Q9BXE9 311 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 ALG13Q9NP73 1137 aaKnown RBP17.7■□□□□ 0.42
AP1S3-202ENST00000396653 SAMSN1Q9NSI8 373 aaKnown RBP17.7■□□□□ 0.42
AP1S3-202ENST00000396653 LMCD1Q9NZU5 365 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 AGAP1Q9UPQ3 857 aa17.7■□□□□ 0.42
AP1S3-202ENST00000396653 ARHGEF37A1IGU5 675 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 M0QZQ0 153 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 SYN3O14994 580 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 P4HA2O15460 535 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 LPXNO60711 386 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 PHACTR2O75167 634 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 KRT19P08727 400 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 PRKCSHP14314 528 aaPredicted RBP17.69■□□□□ 0.42
AP1S3-202ENST00000396653 GCLMP48507 274 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 LILRA4P59901 499 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 MYO1EQ12965 1108 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 TRPC3Q13507 836 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 GRIN2CQ14957 1233 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 IQCB1Q15051 598 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 PTPROQ16827 1216 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.69■□□□□ 0.42
AP1S3-202ENST00000396653 DHX40Q8IX18 779 aaKnown RBP17.69■□□□□ 0.42
AP1S3-202ENST00000396653 TMEM130Q8N3G9 435 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 HASPINQ8TF76 798 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 GPR62Q9BZJ7 368 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 ZBP1Q9H171 429 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 VRTNQ9H8Y1 702 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 TLR9Q9NR96 1032 aa17.69■□□□□ 0.42
AP1S3-202ENST00000396653 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.69■□□□□ 0.42
AP1S3-202ENST00000396653 KCNJ18B7U540 433 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 FSCN2O14926 492 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 VNN1O95497 513 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 CTSAP10619 480 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 POU3F3P20264 500 aaPredicted RBP17.68■□□□□ 0.42
AP1S3-202ENST00000396653 FGFR3P22607 806 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 MTIF2P46199 727 aaKnown RBP17.68■□□□□ 0.42
AP1S3-202ENST00000396653 BRCC3P46736 316 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 NCOA4Q13772 614 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 KCNJ12Q14500 433 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 BMS1Q14692 1282 aaKnown RBP17.68■□□□□ 0.42
AP1S3-202ENST00000396653 MAN2A1Q16706 1144 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 USP41Q3LFD5 358 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 TIGD5Q53EQ6 642 aa17.68■□□□□ 0.42
AP1S3-202ENST00000396653 VPS52Q8N1B4 723 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms