RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PNMA6AP0CW24 399 aaPredicted RBP16.44■□□□□ 0.22
GNE-202ENST00000396594 HIST1H2ADP20671 130 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 ADORA2BP29275 332 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 RPL10AP62906 217 aaKnown RBP16.44■□□□□ 0.22
GNE-202ENST00000396594 WASHC5Q12768 1159 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 SAAL1Q96ER3 474 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 HIST1H2AHQ96KK5 128 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 HIST1H2AJQ99878 128 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 H2AFJQ9BTM1 129 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 NDEL1Q9GZM8 345 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 SMARCAL1Q9NZC9 954 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 NOP53Q9NZM5 478 aaKnown RBP16.44■□□□□ 0.22
GNE-202ENST00000396594 ARHGAP26Q9UNA1 814 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 GMNCA6NCL1 334 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 CREB3O43889 395 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 GZMAP12544 262 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 NCF2P19878 526 aaPredicted RBP16.44■□□□□ 0.22
GNE-202ENST00000396594 MCL1Q07820 350 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 AP1B1Q10567 949 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 PDIA2Q13087 525 aaKnown RBP16.44■□□□□ 0.22
GNE-202ENST00000396594 ZDHHC17Q8IUH5 632 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 FAR2Q96K12 515 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 PCDHGB4Q9UN71 923 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 RRP15Q9Y3B9 282 aaKnown RBP16.44■□□□□ 0.22
GNE-202ENST00000396594 HEY1Q9Y5J3 304 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 VDRP11473 427 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 BACE1P56817 501 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 OR9Q1Q8NGQ5 310 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 SOCS4Q8WXH5 440 aa16.44■□□□□ 0.22
GNE-202ENST00000396594 CDH2P19022 906 aaPredicted RBP16.43■□□□□ 0.22
GNE-202ENST00000396594 DNAJB2P25686 324 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 WDR72Q3MJ13 1102 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 TEKT2Q9UIF3 430 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 ZFP69BQ9UJL9 534 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 ACSL3O95573 720 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 CXCR5P32302 372 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 SPRP35270 261 aaPredicted RBP16.43■□□□□ 0.22
GNE-202ENST00000396594 AARSP49588 968 aaKnown RBP eCLIP16.43■□□□□ 0.22
GNE-202ENST00000396594 GEMIN4P57678 1058 aaKnown RBP16.43■□□□□ 0.22
GNE-202ENST00000396594 DNAL1Q4LDG9 190 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 MAML1Q92585 1016 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 CCDC126Q96EE4 140 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 KIAA1683Q9H0B3 1180 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 CARD9Q9H257 536 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 CASP2P42575 452 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 ARFIP2P53365 341 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.43■□□□□ 0.22
GNE-202ENST00000396594 NUDCD3Q8IVD9 361 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 GLYCTKQ8IVS8 523 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 VTA1Q9NP79 307 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 PSMC3IPQ9P2W1 217 aaPredicted RBP16.43■□□□□ 0.22
GNE-202ENST00000396594 EEF2KO00418 725 aaKnown RBP16.43■□□□□ 0.22
GNE-202ENST00000396594 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
GNE-202ENST00000396594 CNTFP26441 200 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 ANTXR2P58335 489 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 ZBTB17Q13105 803 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 SDE2Q6IQ49 451 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 ZFATQ9P243 1243 aa16.43■□□□□ 0.22
GNE-202ENST00000396594 ZBBXA8MT70 800 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 HLA-DRAP01903 254 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 CHRNA5P30532 468 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 NLRP11P59045 1033 aaKnown RBP16.42■□□□□ 0.22
GNE-202ENST00000396594 SUGP1Q8IWZ8 645 aaKnown RBP16.42■□□□□ 0.22
GNE-202ENST00000396594 SPATA16Q9BXB7 569 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 IRAK4Q9NWZ3 460 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 TBX20Q9UMR3 447 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 ARHGEF28Q8N1W1 1705 aaKnown RBP16.42■□□□□ 0.22
GNE-202ENST00000396594 HGSO14964 777 aaPredicted RBP16.42■□□□□ 0.22
GNE-202ENST00000396594 PDGFRAP16234 1089 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 LHX1P48742 406 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 DPF2Q92785 391 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 KCNH7Q9NS40 1196 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 NCAM2O15394 837 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 FAM200BP0CF97 657 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 AP2B1P63010 937 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 AMPD2Q01433 879 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 TROAPQ12815 778 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 SLC7A14Q8TBB6 771 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 COG1Q8WTW3 980 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 ZC3H4Q9UPT8 1303 aaKnown RBP16.42■□□□□ 0.22
GNE-202ENST00000396594 DPEP1P16444 411 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 TYK2P29597 1187 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 NMT1P30419 496 aaKnown RBP16.42■□□□□ 0.22
GNE-202ENST00000396594 TDRD10Q5VZ19 366 aaKnown RBP16.42■□□□□ 0.22
GNE-202ENST00000396594 MPZL3Q6UWV2 235 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 PID1Q7Z2X4 250 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 UCMAQ8WVF2 138 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 RAPGEF5Q92565 580 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 PCDHB7Q9Y5E2 793 aa16.42■□□□□ 0.22
GNE-202ENST00000396594 MYMKA6NI61 221 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 GYG2O15488 501 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 DYNC1LI2O43237 492 aaPredicted RBP16.41■□□□□ 0.22
GNE-202ENST00000396594 RFC1P35251 1148 aaPredicted RBP16.41■□□□□ 0.22
GNE-202ENST00000396594 GEMP55040 296 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 PTPROQ16827 1216 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 ACBD5Q5T8D3 534 aaPredicted RBP16.41■□□□□ 0.22
GNE-202ENST00000396594 MMGT1Q8N4V1 131 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
GNE-202ENST00000396594 CGRRF1Q99675 332 aa16.41■□□□□ 0.22
GNE-202ENST00000396594 EMILIN2Q9BXX0 1053 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms