RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 H3BRB1 525 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 B4GALT4O60513 344 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 C22orf31O95567 290 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 ITGA4P13612 1032 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 ACO1P21399 889 aaKnown RBP17.22■□□□□ 0.35
SNX6-202ENST00000396526 GUCY2FP51841 1108 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 POU5F1Q01860 360 aaKnown RBP17.22■□□□□ 0.35
SNX6-202ENST00000396526 ALG3Q92685 438 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 MAGOHBQ96A72 148 aaKnown RBP17.22■□□□□ 0.35
SNX6-202ENST00000396526 CYFIP2Q96F07 1278 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 TUT1Q9H6E5 874 aaKnown RBP17.22■□□□□ 0.35
SNX6-202ENST00000396526 CNTN6Q9UQ52 1028 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 GOLGA6L10A6NI86 522 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 CYP1A1P04798 512 aaPredicted RBP17.22■□□□□ 0.35
SNX6-202ENST00000396526 CTNNA1P35221 906 aaKnown RBP17.22■□□□□ 0.35
SNX6-202ENST00000396526 WNT7BP56706 349 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 OSTNP61366 133 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 ZNF668Q96K58 619 aaPredicted RBP17.22■□□□□ 0.35
SNX6-202ENST00000396526 CHORDC1Q9UHD1 332 aaPredicted RBP17.22■□□□□ 0.35
SNX6-202ENST00000396526 ZHX1Q9UKY1 873 aaPredicted RBP17.22■□□□□ 0.35
SNX6-202ENST00000396526 PODXLO00592 558 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 EDN1P05305 212 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 MCF2P10911 925 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 P4HA1P13674 534 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 MTMR3Q13615 1198 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 FAM110CQ1W6H9 321 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 IQSEC1Q6DN90 963 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 GPR142Q7Z601 462 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 ADAT2Q7Z6V5 191 aaKnown RBP17.22■□□□□ 0.35
SNX6-202ENST00000396526 MREGQ8N565 214 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 TMEM35BQ8NCS4 154 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 PKNOX2Q96KN3 472 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 KRT19P08727 400 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 ADCYAP1R1P41586 468 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 MYL6P60660 151 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 CDC42EP1Q00587 391 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 MAMDC4Q6UXC1 1216 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 PSD3Q9NYI0 1048 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 CALB1P05937 261 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 RRM1P23921 792 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 C1QBPQ07021 282 aaKnown RBP17.21■□□□□ 0.35
SNX6-202ENST00000396526 DGKDQ16760 1214 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 FAM187BQ17R55 369 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 ZNF667Q5HYK9 610 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 NLRP7Q8WX94 980 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 ZNF606Q8WXB4 792 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 KRT35Q92764 455 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 C11orf70Q9BRQ4 267 aa17.21■□□□□ 0.35
SNX6-202ENST00000396526 ZSCAN5CA6NGD5 496 aaPredicted RBP17.2■□□□□ 0.34
SNX6-202ENST00000396526 TTI1O43156 1089 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 PHF2O75151 1096 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 CELF2O95319 508 aaKnown RBP17.2■□□□□ 0.34
SNX6-202ENST00000396526 PROZP22891 400 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 LACTBP83111 547 aaPredicted RBP17.2■□□□□ 0.34
SNX6-202ENST00000396526 MBTD1Q05BQ5 628 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 ODF2Q5BJF6 829 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 OR6J1Q8NGC5 347 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 ZNF518BQ9C0D4 1074 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 CDT1Q9H211 546 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 PARVAQ9NVD7 372 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 PARP2Q9UGN5 583 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 SCN4AP35499 1836 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 GOLGA6CA6NDK9 693 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 TTLL13PA6NNM8 815 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 LSM8O95777 96 aaKnown RBP17.2■□□□□ 0.34
SNX6-202ENST00000396526 CST3P01034 146 aaPredicted RBP17.2■□□□□ 0.34
SNX6-202ENST00000396526 GOLGA6DP0CG33 693 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 CD58P19256 250 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 LMAN1P49257 510 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 DUSP28Q4G0W2 176 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 SPRYD7Q5W111 196 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 PHF13Q86YI8 300 aaPredicted RBP17.2■□□□□ 0.34
SNX6-202ENST00000396526 FAM76AQ8TAV0 307 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 FAXDC2Q96IV6 333 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 TINF2Q9BSI4 451 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 PTPRHQ9HD43 1115 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 GOLGA6AQ9NYA3 693 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 FEZ2Q9UHY8 353 aaPredicted RBP17.2■□□□□ 0.34
SNX6-202ENST00000396526 A0A087WZ62 844 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 RRN3P2A6NIE6 340 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 MED7O43513 233 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 PEX5P50542 639 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 NOMO3P69849 1222 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 DCAF12L1Q5VU92 463 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 PASD1Q8IV76 773 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 FDXACB1Q9BRP7 624 aaPredicted RBP17.2■□□□□ 0.34
SNX6-202ENST00000396526 ASB7Q9H672 318 aa17.2■□□□□ 0.34
SNX6-202ENST00000396526 SLC15A5A6NIM6 579 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 GJB1P08034 283 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 SSR1P43307 286 aaKnown RBP17.19■□□□□ 0.34
SNX6-202ENST00000396526 ACVR2BQ13705 512 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 GJC2Q5T442 439 aaPredicted RBP17.19■□□□□ 0.34
SNX6-202ENST00000396526 SLC13A5Q86YT5 568 aaPredicted RBP17.19■□□□□ 0.34
SNX6-202ENST00000396526 IFNLR1Q8IU57 520 aaPredicted RBP17.19■□□□□ 0.34
SNX6-202ENST00000396526 EFCAB13Q8IY85 973 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 BTBD6Q96KE9 485 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 FAM204AQ9H8W3 233 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 CISHQ9NSE2 258 aa17.19■□□□□ 0.34
SNX6-202ENST00000396526 POLR2BP30876 1174 aaKnown RBP17.19■□□□□ 0.34
SNX6-202ENST00000396526 GRB14Q14449 540 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms