RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 C7orf25Q9BPX7 421 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 LBHD1Q9BQE6 289 aaPredicted RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 NT5C3AQ9H0P0 336 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 ECT2Q9H8V3 914 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 HMX1Q9NP08 348 aaPredicted RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 SPATS2LQ9NUQ6 558 aaKnown RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 SZT2Q5T011 3432 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 LGR5O75473 907 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 PAEPP09466 180 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 RARAP10276 462 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 INSRRP14616 1297 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 CYP11B2P19099 503 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 POLGP54098 1239 aaPredicted RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 ZNF211Q13398 564 aaPredicted RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 CUL1Q13616 776 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 KCNA10Q16322 511 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 DGKDQ16760 1214 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 TMEM119Q4V9L6 283 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 RINT1Q6NUQ1 792 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 ZNF571Q7Z3V5 609 aaPredicted RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 ANKS4BQ8N8V4 417 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 ATXN2LQ8WWM7 1075 aaKnown RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 RNF25Q96BH1 459 aaPredicted RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 NACC1Q96RE7 527 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 SNX24Q9Y343 169 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 EYSQ5T1H1 3165 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 KDM3AQ9Y4C1 1321 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 SMNDC1O75940 238 aaKnown RBP eCLIP10.98□□□□□ -0.65
TUBB-208ENST00000396389 OATP04181 439 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 ASGR1P07306 291 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 LINGO3P0C6S8 592 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 GHRP10912 638 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 NQO1P15559 274 aaKnown RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 SLC12A3P55017 1021 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 NCALDP61601 193 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 KCNA1Q09470 495 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 SLC29A2Q14542 456 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 ZC2HC1CQ53FD0 456 aaPredicted RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 SDR16C5Q8N3Y7 309 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 MYCT1Q8N699 235 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 PPTC7Q8NI37 304 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 EPS8L3Q8TE67 593 aaKnown RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 C16orf70Q9BSU1 422 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 CFHR5Q9BXR6 569 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 EPB41L4BQ9H329 900 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 INTS9Q9NV88 658 aaKnown RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 NFASCO94856 1347 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 SRRM3A6NNA2 597 aaPredicted RBP10.97□□□□□ -0.65
TUBB-208ENST00000396389 CCDC169A6NNP5 214 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 SRGAP2CP0DJJ0 459 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 PIGWQ7Z7B1 504 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 TLCD1Q96CP7 247 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 POLR3CQ9BUI4 534 aaPredicted RBP10.97□□□□□ -0.65
TUBB-208ENST00000396389 PIDD1Q9HB75 910 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 CYP26B1Q9NR63 512 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 NOP53Q9NZM5 478 aaKnown RBP10.97□□□□□ -0.65
TUBB-208ENST00000396389 SAMD15Q9P1V8 674 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 PGRMC1O00264 195 aaKnown RBP10.97□□□□□ -0.65
TUBB-208ENST00000396389 HIP1RO75146 1068 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 FGGP02679 453 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 VTNP04004 478 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 SLC9A1P19634 815 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 NMT1P30419 496 aaKnown RBP10.97□□□□□ -0.65
TUBB-208ENST00000396389 TUBP50607 506 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 CASP5P51878 434 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 HIC1Q14526 733 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 PEX26Q7Z412 305 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 CDR2LQ86X02 465 aaPredicted RBP10.97□□□□□ -0.65
TUBB-208ENST00000396389 KLHL29Q96CT2 875 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 SEMA4AQ9H3S1 761 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 ERVK-5Q9HDB9 667 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 TUFT1Q9NNX1 390 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 FGFR1OP2Q9NVK5 253 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 PLXNA1Q9UIW2 1896 aa10.97□□□□□ -0.65
TUBB-208ENST00000396389 ZMYND8Q9ULU4 1186 aaPredicted RBP10.97□□□□□ -0.65
TUBB-208ENST00000396389 PDHA1P08559 390 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 PEX3P56589 373 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 ARHGEF6Q15052 776 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 FAM160B1Q5W0V3 765 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 GJB7Q6PEY0 223 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 SFR1Q86XK3 245 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 C3orf20Q8ND61 904 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 NLRP4Q96MN2 994 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 FMO2Q99518 471 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.96□□□□□ -0.653e-11■□□□□ 10.2
TUBB-208ENST00000396389 SPC25Q9HBM1 224 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 OSGEPQ9NPF4 335 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 ERAP1Q9NZ08 941 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 CEP72Q9P209 647 aa10.96□□□□□ -0.65
TUBB-208ENST00000396389 NKX1-2Q9UD57 310 aaPredicted RBP10.96□□□□□ -0.65
TUBB-208ENST00000396389 MAFBQ9Y5Q3 323 aaPredicted RBP10.96□□□□□ -0.65
TUBB-208ENST00000396389 TBCAO75347 108 aaKnown RBP10.96□□□□□ -0.66
TUBB-208ENST00000396389 EYA4O95677 639 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 CTSHP09668 335 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 CCL5P13501 91 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 FGFR4P22455 802 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 CTCFP49711 727 aaPredicted RBP10.96□□□□□ -0.66
TUBB-208ENST00000396389 ZNF268Q14587 947 aaPredicted RBP10.96□□□□□ -0.66
TUBB-208ENST00000396389 ASIC2Q16515 512 aa10.96□□□□□ -0.66
TUBB-208ENST00000396389 ANKRD20A2Q5SQ80 823 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms