RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ZCWPW2Q504Y3 356 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 CCDC137Q6PK04 289 aaKnown RBP3.59□□□□□ -1.84
VPS13C-203ENST00000395896 GLYCTKQ8IVS8 523 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 THNSL1Q8IYQ7 743 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 FAM71AQ8IYT1 594 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 FNIP1Q8TF40 1166 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 CDCA5Q96FF9 252 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 PSMB7Q99436 277 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 CYLDQ9NQC7 956 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 COQ4Q9Y3A0 265 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 AFG3L2Q9Y4W6 797 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 PSMA2P25787 234 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 ETFBP38117 255 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 TAF6P49848 677 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 KPNA1P52294 538 aaPredicted RBP3.59□□□□□ -1.84
VPS13C-203ENST00000395896 LRRC38Q5VT99 294 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 LRRC55Q6ZSA7 311 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 RCOR2Q8IZ40 523 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 OTUD6BQ8N6M0 293 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 OXCT2Q9BYC2 517 aaPredicted RBP3.59□□□□□ -1.84
VPS13C-203ENST00000395896 PCIF1Q9H4Z3 704 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 EPB41L5Q9HCM4 733 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 TNFSF13BQ9Y275 285 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 UMODL1Q5DID0 1318 aa3.59□□□□□ -1.84
VPS13C-203ENST00000395896 NFKBIEO00221 500 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 KLRC4O43908 158 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PALMO75781 387 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 FAM163BP0C2L3 166 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PRR29P0C7W0 189 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 STAG3L1P0CL83 205 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 BMP6P22004 513 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 NCKAP1LP55160 1127 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CACNB1Q02641 598 aaPredicted RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ITPRIPL1Q6GPH6 555 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 UNC93AQ86WB7 457 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ANKRD13CQ8N6S4 541 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SLITRK1Q96PX8 696 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 KCTD10Q9H3F6 313 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 IGLV3-22A0A075B6J6 115 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 LRRD1A4D1F6 860 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 I3L4J1 428 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SPATA31C1P0DKV0 1188 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 UBA1P22314 1058 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 NR2C2P49116 596 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 MKRN3Q13064 507 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 POLNQ7Z5Q5 900 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 TAAR1Q96RJ0 339 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CHP1Q99653 195 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 EPAS1Q99814 870 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CALN1Q9BXU9 219 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 NFKBIZQ9BYH8 718 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 AAASQ9NRG9 546 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PIN4Q9Y237 131 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ARP10275 920 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PAMP19021 973 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ADORA2AP29274 412 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 EARS2Q5JPH6 523 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ANKRD20A3Q5VUR7 823 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 NDUFAF2Q8N183 169 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 HEXIM2Q96MH2 286 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CPSF3Q9UKF6 684 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 VAV3Q9UKW4 847 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 LRFN2Q9ULH4 789 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 YDJCA8MPS7 323 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 FOXN1O15353 648 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 FBXO21O94952 628 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 INHBAP08476 426 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CCT5P48643 541 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PDK2Q15119 407 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 SRRM1Q8IYB3 904 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PNMA5Q96PV4 448 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 MTG1Q9BT17 334 aaPredicted RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 MMTAG2Q9BU76 263 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 VPS18Q9P253 973 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 KLHL14Q9P2G3 628 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ALG6Q9Y672 507 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 DOCK1Q14185 1865 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 C17orf102A2RUQ5 167 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CELF2O95319 508 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 WEE2P0C1S8 567 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 MARK3P27448 753 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CASP1P29466 404 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 TMEM132BQ14DG7 1078 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 TMEM86AQ8N2M4 240 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ARHGAP18Q8N392 663 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 ACRBPQ8NEB7 543 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 OR6B3Q8NGW1 331 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 FAM49AQ9H0Q0 323 aaPredicted RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 B4GALT4O60513 344 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 DTNBO60941 627 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 MAFO75444 373 aaPredicted RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 CYP11B1P15538 503 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 BCAR1P56945 870 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 PSMC1P62191 440 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 IL9RQ01113 521 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 BFSP2Q13515 415 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 GRIK5Q16478 980 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 FBXO47Q5MNV8 452 aa3.58□□□□□ -1.84
VPS13C-203ENST00000395896 HEATR6Q6AI08 1181 aaKnown RBP3.58□□□□□ -1.84
VPS13C-203ENST00000395896 TMEM161BQ8NDZ6 487 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms