RNA–Protein interactions for RNA: ENST00000395834.5

CDKL1-203, Transcript of cyclin dependent kinase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL1, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-203ENST00000395834 AGO3Q9H9G7 860 aaKnown RBP13.02□□□□□ -0.32
CDKL1-203ENST00000395834 APOBEC3GQ9HC16 384 aaKnown RBP13.02□□□□□ -0.32
CDKL1-203ENST00000395834 FAM105AQ9NUU6 356 aa13.02□□□□□ -0.32
CDKL1-203ENST00000395834 UBQLN1Q9UMX0 589 aaKnown RBP13.02□□□□□ -0.32
CDKL1-203ENST00000395834 REXO2Q9Y3B8 237 aaKnown RBP13.02□□□□□ -0.32
CDKL1-203ENST00000395834 NUB1Q9Y5A7 615 aa13.02□□□□□ -0.32
CDKL1-203ENST00000395834 PCDHA13Q9Y5I0 950 aa13.02□□□□□ -0.32
CDKL1-203ENST00000395834 CYP26A1O43174 497 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 KRT86O43790 486 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 KIF5CO60282 957 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 SKIP12755 728 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 ITGA4P13612 1032 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 TNFAIP3P21580 790 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 POLR2BP30876 1174 aaKnown RBP13.02□□□□□ -0.33
CDKL1-203ENST00000395834 PDE6CP51160 858 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 SMYD5Q6GMV2 418 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.02□□□□□ -0.33
CDKL1-203ENST00000395834 ZNF662Q6ZS27 426 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 U2AF1L4Q8WU68 220 aaKnown RBP13.02□□□□□ -0.33
CDKL1-203ENST00000395834 ELMO3Q96BJ8 720 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 ABHD8Q96I13 439 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 FAXDC2Q96IV6 333 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 CRISPLD2Q9H0B8 497 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 SEPT11Q9NVA2 429 aaKnown RBP13.02□□□□□ -0.33
CDKL1-203ENST00000395834 AGAP1Q9UPQ3 857 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 PCDHB4Q9Y5E5 795 aa13.02□□□□□ -0.33
CDKL1-203ENST00000395834 A0A087X0T9 212 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 SGPL1O95470 568 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 FAM228BP0C875 321 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 KCNE1P15382 129 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 SELPP16109 830 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 MYO1EQ12965 1108 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 CCDC122Q5T0U0 273 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 ALKAL1Q6UXT8 129 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 FAM126BQ8IXS8 530 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 ARID3AQ99856 593 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 AGPAT1Q99943 283 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 XYLT2Q9H1B5 865 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 KLK14Q9P0G3 267 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 SIX4Q9UIU6 781 aa13.01□□□□□ -0.33
CDKL1-203ENST00000395834 PDCD11Q14690 1871 aaKnown RBP13.01□□□□□ -0.33
CDKL1-203ENST00000395834 UMODL1Q5DID0 1318 aa13□□□□□ -0.33
CDKL1-203ENST00000395834 ZNF263O14978 683 aa13□□□□□ -0.33
CDKL1-203ENST00000395834 CD4P01730 458 aa13□□□□□ -0.33
CDKL1-203ENST00000395834 ATF7P17544 494 aaPredicted RBP13□□□□□ -0.33
CDKL1-203ENST00000395834 WDR72Q3MJ13 1102 aa13□□□□□ -0.33
CDKL1-203ENST00000395834 XKR4Q5GH76 650 aa13□□□□□ -0.33
CDKL1-203ENST00000395834 GLRA4Q5JXX5 417 aa13□□□□□ -0.33
CDKL1-203ENST00000395834 LRRC8DQ7L1W4 858 aa13□□□□□ -0.33
CDKL1-203ENST00000395834 TNS4Q8IZW8 715 aa13□□□□□ -0.33
CDKL1-203ENST00000395834 HPDLQ96IR7 371 aa13□□□□□ -0.33
CDKL1-203ENST00000395834 ZMAT2Q96NC0 199 aaKnown RBP13□□□□□ -0.33
CDKL1-203ENST00000395834 RPS6KC1Q96S38 1066 aa13□□□□□ -0.33
CDKL1-203ENST00000395834 TRAIPQ9BWF2 469 aa13□□□□□ -0.33
CDKL1-203ENST00000395834 RNF39Q9H2S5 420 aa13□□□□□ -0.33
CDKL1-203ENST00000395834 NXF1Q9UBU9 619 aaKnown RBP13□□□□□ -0.33
CDKL1-203ENST00000395834 GTF3C5Q9Y5Q8 519 aaPredicted RBP13□□□□□ -0.33
CDKL1-203ENST00000395834 SMIM28A0A1B0GU29 152 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 TNRC18O15417 2968 aaPredicted RBP12.99□□□□□ -0.33
CDKL1-203ENST00000395834 PQBP1O60828 265 aaKnown RBP12.99□□□□□ -0.33
CDKL1-203ENST00000395834 STAU1O95793 577 aaKnown RBP12.99□□□□□ -0.33
CDKL1-203ENST00000395834 CYP11B1P15538 503 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 CYP3A5P20815 502 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 GUCY2FP51841 1108 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 GNG11P61952 73 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 ETF1P62495 437 aaKnown RBP12.99□□□□□ -0.33
CDKL1-203ENST00000395834 TNNC1P63316 161 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 NAB2Q15742 525 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 ZBTB6Q15916 424 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 ALKBH5Q6P6C2 394 aaKnown RBP12.99□□□□□ -0.33
CDKL1-203ENST00000395834 TMEM270Q6UE05 265 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 SCARA5Q6ZMJ2 495 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 GLYCTKQ8IVS8 523 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 EPS8L1Q8TE68 723 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 ZNF592Q92610 1267 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 PGBD4Q96DM1 585 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 ADAM2Q99965 735 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 VRTNQ9H8Y1 702 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 SLC38A7Q9NVC3 462 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 MYO1AQ9UBC5 1043 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 NAGPAQ9UK23 515 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 GUCA1BQ9UMX6 200 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 GIT1Q9Y2X7 761 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 DCDC2CA8MYV0 355 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 DDX3XO00571 662 aaKnown RBP eCLIP12.99□□□□□ -0.33
CDKL1-203ENST00000395834 ZNF623O75123 536 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 ACO1P21399 889 aaKnown RBP12.99□□□□□ -0.33
CDKL1-203ENST00000395834 ARHGAP25P42331 645 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 ASPAP45381 313 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 ATN1P54259 1190 aaPredicted RBP12.99□□□□□ -0.33
CDKL1-203ENST00000395834 DSC3Q14574 896 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 TRAF7Q6Q0C0 670 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 MRPL10Q7Z7H8 261 aaKnown RBP12.99□□□□□ -0.33
CDKL1-203ENST00000395834 SLC47A2Q86VL8 602 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 ZNF677Q86XU0 584 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 RPUSD2Q8IZ73 545 aaKnown RBP12.99□□□□□ -0.33
CDKL1-203ENST00000395834 TTC39CQ8N584 583 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 LRRC52Q8N7C0 313 aa12.99□□□□□ -0.33
CDKL1-203ENST00000395834 RBBP8NLQ8NC74 664 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms