RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 FBXL18Q96ME1 805 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 ADAM33Q9BZ11 813 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 MTRF1LQ9UGC7 380 aaKnown RBP14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 MTUS1Q9ULD2 1270 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 PASKQ96RG2 1323 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 VNN1O95497 513 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 RALAP11233 206 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 RARGP13631 454 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 PPP2R5EQ16537 467 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 GNPTABQ3T906 1256 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 SPATS2Q86XZ4 545 aaKnown RBP14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 FMNL3Q8IVF7 1028 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 DHX37Q8IY37 1157 aaKnown RBP14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 ANKRD42Q8N9B4 389 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 DDX27Q96GQ7 796 aaKnown RBP14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 SENP7Q9BQF6 1050 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 POLR3FQ9H1D9 316 aaPredicted RBP14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 SPON1Q9HCB6 807 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 LOC285556D6RIA3 1793 aa14.37□□□□□ -0.11
GTF2F1-201ENST00000394456 SPATA31C2B4DYI2 1134 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 RASSF9O75901 435 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 HLA-DRAP01903 254 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 SSR1P43307 286 aaKnown RBP14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 CNGA2Q16280 664 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 LBX2Q6XYB7 198 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 NCAPG2Q86XI2 1143 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 CCDC50Q8IVM0 306 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 GPD1LQ8N335 351 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 RDM1Q8NG50 284 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 GDAP1Q8TB36 358 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 IPO4Q8TEX9 1081 aaKnown RBP14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 HVCN1Q96D96 273 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 LRRC19Q9H756 370 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 UVRAGQ9P2Y5 699 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 SRRM3A6NNA2 597 aaPredicted RBP14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 MAPK13O15264 365 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 TNNI1P19237 187 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 STXBP2Q15833 593 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 ZNF568Q3ZCX4 644 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 RHBDF2Q6PJF5 856 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 ABHD15Q6UXT9 468 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 EEPD1Q7L9B9 569 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 FAM228AQ86W67 206 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 SUGP1Q8IWZ8 645 aaKnown RBP14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 TMEM174Q8WUU8 243 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 C9orf72Q96LT7 481 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 ABCF3Q9NUQ8 709 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 EXOC7Q9UPT5 735 aa14.36□□□□□ -0.11
GTF2F1-201ENST00000394456 ZSCAN5DPP0CG00 497 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 KRT10P13645 584 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 HSPA6P17066 643 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 CALCOCO2Q13137 446 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 TTLL12Q14166 644 aaPredicted RBP14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 FAM133BQ5BKY9 247 aaKnown RBP14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 VSTM1Q6UX27 236 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 TAX1BP1Q86VP1 789 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 OR5B17Q8NGF7 314 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 CDHR1Q96JP9 859 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 TIPINQ9BVW5 301 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 DCLK3Q9C098 648 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 CNOT10Q9H9A5 744 aaKnown RBP14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 KLC4Q9NSK0 619 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 PAPPA2Q9BXP8 1791 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 MCM3APO60318 1980 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 PMM2O15305 246 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 ETS1P14921 441 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 ATP4AP20648 1035 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 C6orf118Q5T5N4 469 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 CRELD2Q6UXH1 353 aaPredicted RBP14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 TMC2Q8TDI7 906 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 ASAP3Q8TDY4 903 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 CYP26B1Q9NR63 512 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 ANKFY1Q9P2R3 1169 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 NFASCO94856 1347 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 GGPS1O95749 300 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 AGTP01019 485 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 YBX3P16989 372 aaKnown RBP eCLIP14.35□□□□□ -0.113e-13■■■■□ 19.7
GTF2F1-201ENST00000394456 ALDH5A1P51649 535 aaPredicted RBP14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 ZKSCAN8Q15776 578 aaPredicted RBP14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 TNFAIP8L3Q5GJ75 292 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 SPDYCQ5MJ68 293 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 TMEM270Q6UE05 265 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 C15orf39Q6ZRI6 1047 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 C12orf50Q8NA57 414 aaPredicted RBP14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 CHST13Q8NET6 341 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 ARHGEF2Q92974 986 aaKnown RBP14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 PDLIM7Q9NR12 457 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 C1orf112Q9NSG2 853 aa14.35□□□□□ -0.11
GTF2F1-201ENST00000394456 TMEM120BA0PK00 339 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 SUPT20HL2P0C7V6 817 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 ADCY8P40145 1251 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 PIK3CAP42336 1068 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 RPL7AP62424 266 aaKnown RBP14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 IRX3P78415 501 aaPredicted RBP14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 C9orf131Q5VYM1 1079 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 KAZNQ674X7 775 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 TXNRD3NBQ6F5E7 133 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 MIS18BP1Q6P0N0 1132 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 CAPN12Q6ZSI9 719 aa14.34□□□□□ -0.11
GTF2F1-201ENST00000394456 FUKQ8N0W3 1084 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms