RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 CALCOCO2Q13137 446 aa20.84■□□□□ 0.93
RCCD1-201ENST00000394258 ERMARDQ5T6L9 678 aa20.84■□□□□ 0.93
RCCD1-201ENST00000394258 ZBTB33Q86T24 672 aa20.84■□□□□ 0.93
RCCD1-201ENST00000394258 ART4Q93070 314 aa20.84■□□□□ 0.93
RCCD1-201ENST00000394258 CABS1Q96KC9 395 aa20.84■□□□□ 0.93
RCCD1-201ENST00000394258 PWWP2AQ96N64 755 aa20.84■□□□□ 0.93
RCCD1-201ENST00000394258 CCDC113Q9H0I3 377 aa20.84■□□□□ 0.93
RCCD1-201ENST00000394258 DHX33Q9H6R0 707 aaKnown RBP20.84■□□□□ 0.93
RCCD1-201ENST00000394258 R3HDM2Q9Y2K5 976 aaKnown RBP20.84■□□□□ 0.93
RCCD1-201ENST00000394258 NUB1Q9Y5A7 615 aa20.84■□□□□ 0.93
RCCD1-201ENST00000394258 SRRM3A6NNA2 597 aaPredicted RBP20.83■□□□□ 0.93
RCCD1-201ENST00000394258 H0YCG3 227 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 FZD9O00144 591 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 GNA15P30679 374 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 CUL2Q13617 745 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 SPDYCQ5MJ68 293 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 TREML2Q5T2D2 321 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 YTHDF3Q7Z739 585 aaKnown RBP20.83■□□□□ 0.93
RCCD1-201ENST00000394258 CNPY4Q8N129 248 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 ZNF668Q96K58 619 aaPredicted RBP20.83■□□□□ 0.93
RCCD1-201ENST00000394258 CCDC114Q96M63 670 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 PLVAPQ9BX97 442 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 LRRC19Q9H756 370 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 KIAA1586Q9HCI6 787 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 ADAM22Q9P0K1 906 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 PARP2Q9UGN5 583 aa20.83■□□□□ 0.93
RCCD1-201ENST00000394258 ACSL3O95573 720 aa20.83■□□□□ 0.92
RCCD1-201ENST00000394258 ACO1P21399 889 aaKnown RBP20.83■□□□□ 0.92
RCCD1-201ENST00000394258 CHKAP35790 457 aa20.83■□□□□ 0.92
RCCD1-201ENST00000394258 TCHPQ9BT92 498 aa20.83■□□□□ 0.92
RCCD1-201ENST00000394258 KLHL11Q9NVR0 708 aa20.83■□□□□ 0.92
RCCD1-201ENST00000394258 DNM1LO00429 736 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 THAP12O43422 761 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 TNFSF9P41273 254 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 CLDN10P78369 228 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 ZNF394Q53GI3 561 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 CCDC13Q8IYE1 715 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 AFG3L2Q9Y4W6 797 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 ATP2A1O14983 1001 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 RALAP11233 206 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 MARK3P27448 753 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 NOP14P78316 857 aaKnown RBP20.82■□□□□ 0.92
RCCD1-201ENST00000394258 LONRF1Q17RB8 773 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 CCDC121Q6ZUS5 278 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 PGM2Q96G03 612 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 FAM129AQ9BZQ8 928 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 AAASQ9NRG9 546 aa20.82■□□□□ 0.92
RCCD1-201ENST00000394258 CYP1A1P04798 512 aaPredicted RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 CD58P19256 250 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 UBA1P22314 1058 aaKnown RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 ARL2P36404 184 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 NAMPTP43490 491 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 MMP13P45452 471 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 IFNAR2P48551 515 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 TAS2R40P59535 323 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 ACTN3Q08043 901 aaPredicted RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 MON1BQ7L1V2 547 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 PRUNE1Q86TP1 453 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 RBBP8NLQ8NC74 664 aaPredicted RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 ATXN2LQ8WWM7 1075 aaKnown RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 SUFUQ9UMX1 484 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 C5orf60A6NFR6 353 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 ECM2O94769 699 aaPredicted RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 CST3P01034 146 aaPredicted RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 BPIFB4P59827 614 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 CENPCQ03188 943 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 ZFYVE27Q5T4F4 411 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 APOBEC3FQ8IUX4 373 aaKnown RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 CACNA2D3Q8IZS8 1091 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 CHMP6Q96FZ7 201 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 DDX27Q96GQ7 796 aaKnown RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 PCYT2Q99447 389 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 PRMT1Q99873 361 aaKnown RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 R3HDMLQ9H3Y0 253 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 CNOT10Q9H9A5 744 aaKnown RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 STYXL1Q9Y6J8 313 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 A0A0B4J269 797 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 GSTTP1A0A1W2PQM5 241 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 STAM2O75886 525 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 CREB1P16220 341 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 AUHQ13825 339 aaKnown RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 CAPSQ13938 189 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 C12orf50Q8NA57 414 aaPredicted RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 CDC42EP4Q9H3Q1 356 aaKnown RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 AVENQ9NQS1 362 aaPredicted RBP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 BTBD7Q9P203 1132 aa20.81■□□□□ 0.92
RCCD1-201ENST00000394258 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.81■□□□□ 0.92
RCCD1-201ENST00000394258 GOLGA6L7A0A1B0GV03 622 aa20.8■□□□□ 0.92
RCCD1-201ENST00000394258 SRGAP2CP0DJJ0 459 aa20.8■□□□□ 0.92
RCCD1-201ENST00000394258 RARGP13631 454 aa20.8■□□□□ 0.92
RCCD1-201ENST00000394258 ALDH5A1P51649 535 aaPredicted RBP20.8■□□□□ 0.92
RCCD1-201ENST00000394258 HIRAP54198 1017 aaPredicted RBP20.8■□□□□ 0.92
RCCD1-201ENST00000394258 MAMLD1Q13495 774 aa20.8■□□□□ 0.92
RCCD1-201ENST00000394258 NCOA4Q13772 614 aa20.8■□□□□ 0.92
RCCD1-201ENST00000394258 ATP13A4Q4VNC1 1196 aa20.8■□□□□ 0.92
RCCD1-201ENST00000394258 SLFN12LQ6IEE8 588 aa20.8■□□□□ 0.92
RCCD1-201ENST00000394258 NCAPG2Q86XI2 1143 aa20.8■□□□□ 0.92
RCCD1-201ENST00000394258 ABRAQ8N0Z2 381 aa20.8■□□□□ 0.92
RCCD1-201ENST00000394258 RASGRF2O14827 1237 aa20.8■□□□□ 0.92
RCCD1-201ENST00000394258 ATG7O95352 703 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms