RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CYP3A5P20815 502 aa26.12■■□□□ 1.77
LRFN4-202ENST00000393952 RFX1P22670 979 aa26.12■■□□□ 1.77
LRFN4-202ENST00000393952 ZNF699Q32M78 642 aa26.12■■□□□ 1.77
LRFN4-202ENST00000393952 GLB1LQ6UWU2 654 aa26.12■■□□□ 1.77
LRFN4-202ENST00000393952 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.12■■□□□ 1.77
LRFN4-202ENST00000393952 RPUSD2Q8IZ73 545 aaKnown RBP26.12■■□□□ 1.77
LRFN4-202ENST00000393952 KREMEN1Q96MU8 473 aa26.12■■□□□ 1.77
LRFN4-202ENST00000393952 ZNF830Q96NB3 372 aaPredicted RBP26.12■■□□□ 1.77
LRFN4-202ENST00000393952 DNAJC7Q99615 494 aa26.12■■□□□ 1.77
LRFN4-202ENST00000393952 HTATIP2Q9BUP3 242 aa26.12■■□□□ 1.77
LRFN4-202ENST00000393952 DAAM1Q9Y4D1 1078 aa26.12■■□□□ 1.77
LRFN4-202ENST00000393952 PCDHB7Q9Y5E2 793 aa26.12■■□□□ 1.77
LRFN4-202ENST00000393952 SCN1AP35498 2009 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 PPEF2O14830 753 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 POMCP01189 267 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 JAM2P57087 298 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 NAB2Q15742 525 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 ARHGAP44Q17R89 818 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 GPIHBP1Q8IV16 184 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 LRRC8AQ8IWT6 810 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 OR8K1Q8NGG5 319 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 SPAG5Q96R06 1193 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 PANX2Q96RD6 677 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 SLC38A7Q9NVC3 462 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 LRFN2Q9ULH4 789 aa26.11■■□□□ 1.77
LRFN4-202ENST00000393952 R3HCC1Q9Y3T6 440 aaKnown RBP26.11■■□□□ 1.77
LRFN4-202ENST00000393952 C9orf57Q5W0N0 161 aa26.1■■□□□ 1.77
LRFN4-202ENST00000393952 E4F1Q66K89 784 aaPredicted RBP26.1■■□□□ 1.77
LRFN4-202ENST00000393952 BADQ92934 168 aa26.1■■□□□ 1.77
LRFN4-202ENST00000393952 STK33Q9BYT3 514 aa26.1■■□□□ 1.77
LRFN4-202ENST00000393952 IL23AQ9NPF7 189 aa26.1■■□□□ 1.77
LRFN4-202ENST00000393952 ANO9A1A5B4 782 aa26.09■■□□□ 1.77
LRFN4-202ENST00000393952 PFKMP08237 780 aa26.09■■□□□ 1.77
LRFN4-202ENST00000393952 ATICP31939 592 aa26.09■■□□□ 1.77
LRFN4-202ENST00000393952 GRIK3Q13003 919 aa26.09■■□□□ 1.77
LRFN4-202ENST00000393952 DRAP1Q14919 205 aaPredicted RBP26.09■■□□□ 1.77
LRFN4-202ENST00000393952 CRIPAKQ8N1N5 446 aa26.09■■□□□ 1.77
LRFN4-202ENST00000393952 TAF4BQ92750 862 aa26.09■■□□□ 1.77
LRFN4-202ENST00000393952 HPDLQ96IR7 371 aa26.09■■□□□ 1.77
LRFN4-202ENST00000393952 ARID3AQ99856 593 aa26.09■■□□□ 1.77
LRFN4-202ENST00000393952 GPR88Q9GZN0 384 aa26.09■■□□□ 1.77
LRFN4-202ENST00000393952 KCNF1Q9H3M0 494 aa26.09■■□□□ 1.77
LRFN4-202ENST00000393952 ABHD14A-ACY1A0A1B0GW23 586 aa26.08■■□□□ 1.77
LRFN4-202ENST00000393952 PNMA6AP0CW24 399 aaPredicted RBP26.08■■□□□ 1.77
LRFN4-202ENST00000393952 MFAP3P55082 362 aa26.08■■□□□ 1.77
LRFN4-202ENST00000393952 GCNT1Q02742 428 aa26.08■■□□□ 1.77
LRFN4-202ENST00000393952 NOMO2Q5JPE7 1267 aa26.08■■□□□ 1.77
LRFN4-202ENST00000393952 NPAS4Q8IUM7 802 aa26.08■■□□□ 1.77
LRFN4-202ENST00000393952 CACNG4Q9UBN1 327 aa26.08■■□□□ 1.77
LRFN4-202ENST00000393952 POLIQ9UNA4 740 aa26.08■■□□□ 1.77
LRFN4-202ENST00000393952 F8VZ95 297 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 PIRO00625 290 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 EVI5O60447 810 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 SYN1P17600 705 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 LRPAP1P30533 357 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 GATMP50440 423 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 CUL2Q13617 745 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 ZNF667Q5HYK9 610 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 NIF3L1Q9GZT8 377 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 NXF1Q9UBU9 619 aaKnown RBP26.07■■□□□ 1.76
LRFN4-202ENST00000393952 STAU1O95793 577 aaKnown RBP26.07■■□□□ 1.76
LRFN4-202ENST00000393952 PPIGQ13427 754 aaKnown RBP eCLIP26.07■■□□□ 1.76
LRFN4-202ENST00000393952 SFMBT2Q5VUG0 894 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 LRRC52Q8N7C0 313 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 URGCPQ8TCY9 931 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 NUCKS1Q9H1E3 243 aaKnown RBP26.07■■□□□ 1.76
LRFN4-202ENST00000393952 VRTNQ9H8Y1 702 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 ZMYND8Q9ULU4 1186 aaPredicted RBP26.07■■□□□ 1.76
LRFN4-202ENST00000393952 MYO6Q9UM54 1294 aa26.07■■□□□ 1.76
LRFN4-202ENST00000393952 STAT1P42224 750 aa26.06■■□□□ 1.76
LRFN4-202ENST00000393952 FPGSQ05932 587 aa26.06■■□□□ 1.76
LRFN4-202ENST00000393952 TSR1Q2NL82 804 aaKnown RBP26.06■■□□□ 1.76
LRFN4-202ENST00000393952 WDR72Q3MJ13 1102 aa26.06■■□□□ 1.76
LRFN4-202ENST00000393952 WDR59Q6PJI9 974 aa26.06■■□□□ 1.76
LRFN4-202ENST00000393952 SCARA5Q6ZMJ2 495 aa26.06■■□□□ 1.76
LRFN4-202ENST00000393952 C16orf59Q7L2K0 433 aa26.06■■□□□ 1.76
LRFN4-202ENST00000393952 ENOSF1Q7L5Y1 443 aa26.06■■□□□ 1.76
LRFN4-202ENST00000393952 TMEM139Q8IV31 216 aa26.06■■□□□ 1.76
LRFN4-202ENST00000393952 TRIM44Q96DX7 344 aaPredicted RBP26.06■■□□□ 1.76
LRFN4-202ENST00000393952 FAM81BQ96LP2 452 aa26.06■■□□□ 1.76
LRFN4-202ENST00000393952 RNF216Q9NWF9 866 aaPredicted RBP26.06■■□□□ 1.76
LRFN4-202ENST00000393952 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.06■■□□□ 1.76
LRFN4-202ENST00000393952 CASTOR2A6NHX0 329 aa26.05■■□□□ 1.76
LRFN4-202ENST00000393952 FOXN3O00409 490 aaPredicted RBP26.05■■□□□ 1.76
LRFN4-202ENST00000393952 TBXAS1P24557 533 aaPredicted RBP26.05■■□□□ 1.76
LRFN4-202ENST00000393952 HNRNPH3P31942 346 aaKnown RBP26.05■■□□□ 1.76
LRFN4-202ENST00000393952 ASPAP45381 313 aa26.05■■□□□ 1.76
LRFN4-202ENST00000393952 CCZ1BP86790 482 aa26.05■■□□□ 1.76
LRFN4-202ENST00000393952 CCZ1P86791 482 aaPredicted RBP26.05■■□□□ 1.76
LRFN4-202ENST00000393952 MYO1EQ12965 1108 aa26.05■■□□□ 1.76
LRFN4-202ENST00000393952 TUSC3Q13454 348 aa26.05■■□□□ 1.76
LRFN4-202ENST00000393952 ABI1Q8IZP0 508 aa26.05■■□□□ 1.76
LRFN4-202ENST00000393952 SHC3Q92529 594 aa26.05■■□□□ 1.76
LRFN4-202ENST00000393952 SYN2Q92777 582 aaPredicted RBP26.05■■□□□ 1.76
LRFN4-202ENST00000393952 CASD1Q96PB1 797 aa26.05■■□□□ 1.76
LRFN4-202ENST00000393952 TBC1D13Q9NVG8 400 aa26.05■■□□□ 1.76
LRFN4-202ENST00000393952 FNDC1Q4ZHG4 1894 aaPredicted RBP26.04■■□□□ 1.76
LRFN4-202ENST00000393952 HOXA2O43364 376 aa26.04■■□□□ 1.76
LRFN4-202ENST00000393952 GFPT2O94808 682 aa26.04■■□□□ 1.76
LRFN4-202ENST00000393952 UPP2O95045 317 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms