RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 C4orf33Q8N1A6 199 aa9.08□□□□□ -0.96
GABRA1-202ENST00000393943 GPD1LQ8N335 351 aa9.08□□□□□ -0.96
GABRA1-202ENST00000393943 ZCCHC9Q8N567 271 aaKnown RBP9.08□□□□□ -0.96
GABRA1-202ENST00000393943 TBC1D16Q8TBP0 767 aa9.08□□□□□ -0.96
GABRA1-202ENST00000393943 VCPIP1Q96JH7 1222 aa9.08□□□□□ -0.96
GABRA1-202ENST00000393943 LXNQ9BS40 222 aa9.08□□□□□ -0.96
GABRA1-202ENST00000393943 MMTAG2Q9BU76 263 aaKnown RBP9.08□□□□□ -0.96
GABRA1-202ENST00000393943 DCLK3Q9C098 648 aa9.08□□□□□ -0.96
GABRA1-202ENST00000393943 UPF3AQ9H1J1 476 aaKnown RBP9.08□□□□□ -0.96
GABRA1-202ENST00000393943 IL17RBQ9NRM6 502 aa9.08□□□□□ -0.96
GABRA1-202ENST00000393943 HEY2Q9UBP5 337 aa9.08□□□□□ -0.96
GABRA1-202ENST00000393943 LGALS13Q9UHV8 139 aa9.08□□□□□ -0.96
GABRA1-202ENST00000393943 SMIM31A0A1B0GVY4 71 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 C2CD2LO14523 706 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 TCEA3O75764 348 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 TMCC1O94876 653 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 PYGBP11216 843 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 KLRC3Q07444 240 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 TTC39BQ5VTQ0 682 aaPredicted RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 CWF19L1Q69YN2 538 aaKnown RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 C12orf50Q8NA57 414 aaPredicted RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 SUPT20HQ8NEM7 779 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 DEPDC1BQ8WUY9 529 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 FAF2Q96CS3 445 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 C11orf70Q9BRQ4 267 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 TRIM56Q9BRZ2 755 aaKnown RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 ASNSD1Q9NWL6 643 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 SLC4A7Q9Y6M7 1214 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 MED24O75448 989 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 RPS6KA4O75676 772 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 NOL4O94818 638 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 ZBED1O96006 694 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 SHBGP04278 402 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 KRT16P08779 473 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 TMEM191BP0C7N4 346 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 RARAP10276 462 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 PSMA2P25787 234 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 GNA15P30679 374 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 SREBF1P36956 1147 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 ART3Q13508 389 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 CEP55Q53EZ4 464 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 SLC9A9Q8IVB4 645 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 TTC39CQ8N584 583 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 TMC2Q8TDI7 906 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 SLC26A7Q8TE54 656 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 PIK3R5Q8WYR1 880 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 RNF25Q96BH1 459 aaPredicted RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 ZFRQ96KR1 1074 aaKnown RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 C17orf75Q9HAS0 396 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 TAGLN3Q9UI15 199 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 SSX2IPQ9Y2D8 614 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 ZC3H4Q9UPT8 1303 aaKnown RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 PTDSS1P48651 473 aaKnown RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 PEX3P56589 373 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 FAM47CQ5HY64 1035 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 MEX3CQ5U5Q3 659 aaKnown RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 RHPN2Q8IUC4 686 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 PRELID2Q8N945 189 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 DTX3LQ8TDB6 740 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 ZNF317Q96PQ6 595 aaPredicted RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 SSU72Q9NP77 194 aaKnown RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 HACD3Q9P035 362 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 WDR64B1ANS9 1081 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 PROSCO94903 275 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 HARSP12081 509 aaKnown RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 AKR1B1P15121 316 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 KRT4P19013 534 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 SLC12A3P55017 1021 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 AP1B1Q10567 949 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 CNGA3Q16281 694 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 SGSM1Q2NKQ1 1148 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 C16orf89Q6UX73 402 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 ACAD11Q709F0 780 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 KIAA0825Q8IV33 1275 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 B4GALNT2Q8NHY0 566 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 ABTB1Q969K4 478 aaPredicted RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 ARHGEF26Q96DR7 871 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 TSPYL2Q9H2G4 693 aaPredicted RBP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.07□□□□□ -0.96
GABRA1-202ENST00000393943 PCDH9Q9HC56 1237 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 PFDN4Q9NQP4 134 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 SALL4Q9UJQ4 1053 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 C2CD2Q9Y426 696 aa9.07□□□□□ -0.96
GABRA1-202ENST00000393943 CYP3A7-CYP3A51PA0A087WV96 503 aa9.06□□□□□ -0.96
GABRA1-202ENST00000393943 WNT7AO00755 349 aa9.06□□□□□ -0.96
GABRA1-202ENST00000393943 DNALI1O14645 258 aaPredicted RBP9.06□□□□□ -0.96
GABRA1-202ENST00000393943 PRPF4O43172 522 aaKnown RBP eCLIP9.06□□□□□ -0.96
GABRA1-202ENST00000393943 SMNDC1O75940 238 aaKnown RBP eCLIP9.06□□□□□ -0.96
GABRA1-202ENST00000393943 PSMG1O95456 288 aa9.06□□□□□ -0.96
GABRA1-202ENST00000393943 ENO1P06733 434 aaKnown RBP9.06□□□□□ -0.96
GABRA1-202ENST00000393943 MYCLP12524 364 aaPredicted RBP9.06□□□□□ -0.96
GABRA1-202ENST00000393943 CYP3A7P24462 503 aa9.06□□□□□ -0.96
GABRA1-202ENST00000393943 COPB2P35606 906 aa9.06□□□□□ -0.96
GABRA1-202ENST00000393943 RGS2P41220 211 aa9.06□□□□□ -0.96
GABRA1-202ENST00000393943 NLRP11P59045 1033 aaKnown RBP9.06□□□□□ -0.96
GABRA1-202ENST00000393943 NFX1Q12986 1120 aaKnown RBP9.06□□□□□ -0.96
GABRA1-202ENST00000393943 STX3Q13277 289 aa9.06□□□□□ -0.96
GABRA1-202ENST00000393943 PTK7Q13308 1070 aa9.06□□□□□ -0.96
GABRA1-202ENST00000393943 CMPK2Q5EBM0 449 aa9.06□□□□□ -0.96
GABRA1-202ENST00000393943 RABGAP1LQ5R372 815 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms