RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 PARP10Q53GL7 1025 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 C16orf89Q6UX73 402 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 LDHAL6AQ6ZMR3 332 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 VSTM4Q8IW00 320 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 METTL13Q8N6R0 699 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 C10orf53Q8N6V4 93 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 GJA10Q969M2 543 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 ULK4Q96C45 1275 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 TSSK1BQ9BXA7 367 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 DDX47Q9H0S4 455 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 IRF2BPLQ9H1B7 796 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 CNNM2Q9H8M5 875 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SUGCTQ9HAC7 445 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 TOR4AQ9NXH8 423 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PSD3Q9NYI0 1048 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SENP1Q9P0U3 644 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 C14orf166Q9Y224 244 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 LOC100506127A0A0U1RQW1 187 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZNF879B4DU55 563 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 E9PBE3 544 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 TK2O00142 265 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 KHDRBS3O75525 346 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 IFNA14P01570 189 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 EIF2S1P05198 315 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 RB1P06400 928 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 JUNDP17535 347 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 CDH3P22223 829 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ETFBP38117 255 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 KPNA2P52292 529 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 RPP38P78345 283 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 PTPN12Q05209 780 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 TFCP2Q12800 502 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 AP3B2Q13367 1082 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PTPN20Q4JDL3 420 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 NAALADL2Q58DX5 795 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 TOR1AIP1Q5JTV8 583 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 TCHHL1Q5QJ38 904 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 ETFRF1Q6IPR1 90 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 RWDD4Q6NW29 188 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 PKN3Q6P5Z2 889 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PLCZ1Q86YW0 608 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZNF615Q8N8J6 731 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 C1orf54Q8WWF1 131 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ARMC5Q96C12 935 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 FAM227BQ96M60 508 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 NUDT12Q9BQG2 462 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ACAT2Q9BWD1 397 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 UBXN6Q9BZV1 441 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZNF304Q9HCX3 659 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 CREBZFQ9NS37 354 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 C1orf112Q9NSG2 853 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 PCMTD2Q9NV79 361 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 HPF1Q9NWY4 346 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 TUBA8Q9NY65 449 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 ASAP1Q9ULH1 1129 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SIK3Q9Y2K2 1263 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 USP15Q9Y4E8 981 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 PCDHA5Q9Y5H7 936 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 KIF24Q5T7B8 1368 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 UBA6A0AVT1 1052 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 CCNT2O60583 730 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 ECDO95905 644 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 SCTRP47872 440 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 AP2S1P53680 142 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 CYP4F2P78329 520 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 CYP4F3Q08477 520 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ADAM9Q13443 819 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SPIDRQ14159 915 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SMCO1Q147U7 214 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 SEL1L3Q68CR1 1132 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZNF671Q8TAW3 534 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 CIDECQ96AQ7 238 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 E2F7Q96AV8 911 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 INTS4Q96HW7 963 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 TRAPPC9Q96Q05 1148 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 TMEM237Q96Q45 408 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 TEKT3Q9BXF9 490 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 TDRD1Q9BXT4 1180 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 RNF38Q9H0F5 515 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ATXN2Q99700 1313 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 PITPNM2Q9BZ72 1349 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 TTLL8A6PVC2 850 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 O00370 1275 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 RNF113AO15541 343 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 TADA2AO75478 443 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 KRT38O76015 456 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 MBD4O95243 580 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZBED1O96006 694 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ATP1A1P05023 1023 aaKnown RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 ZNF37AP17032 561 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 CALML3P27482 149 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 IL12AP29459 219 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 COPZ1P61923 177 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 ITGA7Q13683 1181 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 QPRTQ15274 297 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 EXOC3L4Q17RC7 722 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 OGFRL1Q5TC84 451 aaPredicted RBP3.42□□□□□ -1.86
PHF3-202ENST00000393387 ARHGEF16Q5VV41 709 aa3.42□□□□□ -1.86
PHF3-202ENST00000393387 FAAH2Q6GMR7 532 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms