RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 DPH6Q7L8W6 267 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 VPS36Q86VN1 386 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 VSTM4Q8IW00 320 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 EFCAB13Q8IY85 973 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 TMEM192Q8IY95 271 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 PPM1KQ8N3J5 372 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 FIBCD1Q8N539 461 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 APPL2Q8NEU8 664 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 TAS1R2Q8TE23 839 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 LINC01599Q8WXQ3 324 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 TMEM169Q96HH4 297 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 ZNF558Q96NG5 402 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 SAMD11Q96NU1 681 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 PPP1R10Q96QC0 940 aaKnown RBP3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 MMS19Q96T76 1030 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 POP1Q99575 1024 aaKnown RBP3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 LSM14BQ9BX40 385 aaKnown RBP3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 OXCT2Q9BYC2 517 aaPredicted RBP3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 NIF3L1Q9GZT8 377 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 INTS2Q9H0H0 1204 aaKnown RBP3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 VRTNQ9H8Y1 702 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 CYP3A43Q9HB55 503 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 FAM207AQ9NSI2 230 aaPredicted RBP3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 TBC1D13Q9NVG8 400 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 CEP72Q9P209 647 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 FAN1Q9Y2M0 1017 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 TANC1Q9C0D5 1861 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 HTTP42858 3142 aa3.8□□□□□ -1.8
ATP2B1-203ENST00000393164 A0A1W2PQJ5 194 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 KPNA7A9QM74 516 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 TMEM189-UBE2V1I3L0A0 370 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 PTGESO14684 152 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 TADA2AO75478 443 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 ASS1P00966 412 aaKnown RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 FGFR1P11362 822 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 ODC1P11926 461 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 PON1P27169 355 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 OR1G1P47890 313 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 RAB30Q15771 203 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 WDR72Q3MJ13 1102 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CBWD6Q4V339 395 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 EPC2Q52LR7 807 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CBWD3Q5JTY5 395 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CLLU1OSQ5K130 101 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CBWD5Q5RIA9 395 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 C9orf57Q5W0N0 161 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.79□□□□□ -1.83e-6■■■■□ 22
ATP2B1-203ENST00000393164 C15orf39Q6ZRI6 1047 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 TMC6Q7Z403 805 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 HERC6Q8IVU3 1022 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 THEM5Q8N1Q8 247 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 TMEM86AQ8N2M4 240 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 C1orf127Q8N9H9 656 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 ZSWIM2Q8NEG5 633 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 OR5B17Q8NGF7 314 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 NAP1L5Q96NT1 182 aaPredicted RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CRACR2AQ9BSW2 395 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 OSBPL7Q9BZF2 842 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 NXF1Q9UBU9 619 aaKnown RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 PUF60Q9UHX1 559 aaKnown RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 MSRAQ9UJ68 235 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 SSX2IPQ9Y2D8 614 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 ARIH1Q9Y4X5 557 aaPredicted RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 BZW2Q9Y6E2 419 aaKnown RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 SF3B1O75533 1304 aaKnown RBP eCLIP3.79□□□□□ -1.83e-6■■■■■ 124.8
ATP2B1-203ENST00000393164 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 ANO9A1A5B4 782 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CASTOR2A6NHX0 329 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 PIRO00625 290 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 SYN3O14994 580 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 LPXNO60711 386 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 IPO7O95373 1038 aaKnown RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 UCHL3P15374 230 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 BMP8BP34820 402 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 STAT1P42224 750 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 LHX1P48742 406 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 MYL6P60660 151 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 POLR2FP61218 127 aaKnown RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 ZBED6P86452 979 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CREMQ03060 361 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 DSC1Q08554 894 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 RAPGEF1Q13905 1077 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 KLHDC7AQ5VTJ3 777 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 KIAA1841Q6NSI8 718 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 FAM117BQ6P1L5 589 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 APTXQ7Z2E3 356 aaKnown RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 TOP6BLQ8N6T0 577 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CCDC112Q8NEF3 446 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 TNIP3Q96KP6 325 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 ZMAT2Q96NC0 199 aaKnown RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 CASD1Q96PB1 797 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 PLVAPQ9BX97 442 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 STK33Q9BYT3 514 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 SNX25Q9H3E2 840 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 UBE2TQ9NPD8 197 aaPredicted RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 LUC7LQ9NQ29 371 aaKnown RBP3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 SPG21Q9NZD8 308 aa3.79□□□□□ -1.8
ATP2B1-203ENST00000393164 TUBGCP4Q9UGJ1 667 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms