RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 EIF1ADQ8N9N8 165 aaKnown RBP21.45■■□□□ 1.02
PTPN11-202ENST00000392597 NPLOC4Q8TAT6 608 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 ANKRD36BP1Q96IX9 119 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 NIF3L1Q9GZT8 377 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 SLITRK6Q9H5Y7 841 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 CNOT8Q9UFF9 292 aaKnown RBP21.45■■□□□ 1.02
PTPN11-202ENST00000392597 A0A0U1RQG5 324 aaPredicted RBP21.45■■□□□ 1.02
PTPN11-202ENST00000392597 HEXIM1O94992 359 aaKnown RBP21.45■■□□□ 1.02
PTPN11-202ENST00000392597 CST3P01034 146 aaPredicted RBP21.45■■□□□ 1.02
PTPN11-202ENST00000392597 TNNC2P02585 160 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 IQCF3P0C7M6 154 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 TMEM191BP0C7N4 346 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 GNA15P30679 374 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 PPFIA1Q13136 1202 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 MORN1Q5T089 497 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 C17orf99Q6UX52 265 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 CD101Q93033 1021 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 FAM212AQ96EL1 285 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 FAXDC2Q96IV6 333 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 VCPIP1Q96JH7 1222 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 ZSWIM1Q9BR11 485 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 RPF1Q9H9Y2 349 aaKnown RBP21.45■■□□□ 1.02
PTPN11-202ENST00000392597 RNF186Q9NXI6 227 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 ZHX1Q9UKY1 873 aaPredicted RBP21.45■■□□□ 1.02
PTPN11-202ENST00000392597 KAT6AQ92794 2004 aa21.45■■□□□ 1.02
PTPN11-202ENST00000392597 UMODL1Q5DID0 1318 aa21.44■■□□□ 1.02
PTPN11-202ENST00000392597 A0A087WZ62 844 aa21.44■■□□□ 1.02
PTPN11-202ENST00000392597 ATMINO43313 823 aaPredicted RBP21.44■■□□□ 1.02
PTPN11-202ENST00000392597 GLI1P08151 1106 aa21.44■■□□□ 1.02
PTPN11-202ENST00000392597 TNNT3P45378 269 aaPredicted RBP21.44■■□□□ 1.02
PTPN11-202ENST00000392597 NSFP46459 744 aaKnown RBP21.44■■□□□ 1.02
PTPN11-202ENST00000392597 MYL6P60660 151 aa21.44■■□□□ 1.02
PTPN11-202ENST00000392597 NNTQ13423 1086 aa21.44■■□□□ 1.02
PTPN11-202ENST00000392597 TRPC3Q13507 836 aa21.44■■□□□ 1.02
PTPN11-202ENST00000392597 MESDQ14696 234 aa21.44■■□□□ 1.02
PTPN11-202ENST00000392597 GRIK4Q16099 956 aa21.44■■□□□ 1.02
PTPN11-202ENST00000392597 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.44■■□□□ 1.02
PTPN11-202ENST00000392597 ZNF668Q96K58 619 aaPredicted RBP21.44■■□□□ 1.02
PTPN11-202ENST00000392597 RNPC3Q96LT9 517 aaKnown RBP21.44■■□□□ 1.02
PTPN11-202ENST00000392597 FDXACB1Q9BRP7 624 aaPredicted RBP21.44■■□□□ 1.02
PTPN11-202ENST00000392597 SAGE1Q9NXZ1 904 aa21.44■■□□□ 1.02
PTPN11-202ENST00000392597 RAD51CO43502 376 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 CLSTN1O94985 981 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 FGGP02679 453 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 COMTP21964 271 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 CTNNA2P26232 953 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 TFAMQ00059 246 aaKnown RBP21.43■■□□□ 1.02
PTPN11-202ENST00000392597 MAP2K5Q13163 448 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 ZNF410Q86VK4 478 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 EFCAB13Q8IY85 973 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 ALG3Q92685 438 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 CAVIN3Q969G5 261 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 CPA4Q9UI42 421 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 CCDC66A2RUB6 948 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 RRN3P2A6NIE6 340 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 TRPA1O75762 1119 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 AARSP49588 968 aaKnown RBP eCLIP21.43■■□□□ 1.02
PTPN11-202ENST00000392597 PAK2Q13177 524 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 GLIPR1L2Q4G1C9 344 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 MON1BQ7L1V2 547 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 KLHL7Q8IXQ5 586 aa21.43■■□□□ 1.02
PTPN11-202ENST00000392597 FAM170AA1A519 330 aa21.42■■□□□ 1.02
PTPN11-202ENST00000392597 GPR25O00155 361 aa21.42■■□□□ 1.02
PTPN11-202ENST00000392597 SART1O43290 800 aaKnown RBP21.42■■□□□ 1.02
PTPN11-202ENST00000392597 OAS2P29728 719 aaKnown RBP21.42■■□□□ 1.02
PTPN11-202ENST00000392597 CTNNA1P35221 906 aaKnown RBP21.42■■□□□ 1.02
PTPN11-202ENST00000392597 PEX5P50542 639 aa21.42■■□□□ 1.02
PTPN11-202ENST00000392597 YWHAEP62258 255 aaKnown RBP21.42■■□□□ 1.02
PTPN11-202ENST00000392597 NOMO3P69849 1222 aa21.42■■□□□ 1.02
PTPN11-202ENST00000392597 FAM193AP78312 1265 aa21.42■■□□□ 1.02
PTPN11-202ENST00000392597 MRPS25P82663 173 aaKnown RBP21.42■■□□□ 1.02
PTPN11-202ENST00000392597 MARCH8Q5T0T0 291 aa21.42■■□□□ 1.02
PTPN11-202ENST00000392597 NAA35Q5VZE5 725 aa21.42■■□□□ 1.02
PTPN11-202ENST00000392597 PHF13Q86YI8 300 aaPredicted RBP21.42■■□□□ 1.02
PTPN11-202ENST00000392597 GSPT2Q8IYD1 628 aaKnown RBP21.42■■□□□ 1.02
PTPN11-202ENST00000392597 AP1M1Q9BXS5 423 aa21.42■■□□□ 1.02
PTPN11-202ENST00000392597 XYLT2Q9H1B5 865 aa21.42■■□□□ 1.02
PTPN11-202ENST00000392597 PDZD7Q9H5P4 517 aa21.42■■□□□ 1.02
PTPN11-202ENST00000392597 EPB41L5Q9HCM4 733 aa21.42■■□□□ 1.02
PTPN11-202ENST00000392597 HPCAL4Q9UM19 191 aa21.42■■□□□ 1.02
PTPN11-202ENST00000392597 A6NJR5 290 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 BHMG1C9JSJ3 638 aaPredicted RBP21.41■■□□□ 1.02
PTPN11-202ENST00000392597 CALCAP01258 141 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 VTNP04004 478 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 CXCL8P10145 99 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 GUCY2DQ02846 1103 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 ZNF699Q32M78 642 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 LIN9Q5TKA1 542 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 MAATS1Q7Z4T9 603 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 CEP120Q8N960 986 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 CCDC26Q8TAB7 109 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 CPA5Q8WXQ8 436 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 CYFIP2Q96F07 1278 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 ASB7Q9H672 318 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 MED4Q9NPJ6 270 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 PCDHA3Q9Y5H8 950 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 GOLGA6L10A0A0M3HER8 536 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 TMEM110-MUSTN1A8MSY1 372 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 THAP12O43422 761 aa21.41■■□□□ 1.02
PTPN11-202ENST00000392597 SPOPO43791 374 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms