RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 GRHL1Q9NZI5 618 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 H0Y3Z8 333 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 GHRP10912 638 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 NQO1P15559 274 aaKnown RBP11.54□□□□□ -0.56
BRF1-204ENST00000392557 GBP1P32455 592 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 NPTX2P47972 431 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 ACTR2P61160 394 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 LMBRD2Q68DH5 695 aaPredicted RBP11.54□□□□□ -0.56
BRF1-204ENST00000392557 C4orf19Q8IY42 314 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 ATP6V0A1Q93050 837 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 TMEM143Q96AN5 459 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 CLMNQ96JQ2 1002 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 GINM1Q9NU53 330 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 DONSONQ9NYP3 566 aa11.54□□□□□ -0.56
BRF1-204ENST00000392557 NOP53Q9NZM5 478 aaKnown RBP11.54□□□□□ -0.56
BRF1-204ENST00000392557 RTN2O75298 545 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 USP2O75604 605 aaPredicted RBP11.53□□□□□ -0.56
BRF1-204ENST00000392557 RGS20O76081 388 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 PPP3CAQ08209 521 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 ITIH4Q14624 930 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 LACTB2Q53H82 288 aaPredicted RBP11.53□□□□□ -0.56
BRF1-204ENST00000392557 FBF1Q8TES7 1133 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 TOPORSQ9NS56 1045 aaPredicted RBP11.53□□□□□ -0.56
BRF1-204ENST00000392557 NCANO14594 1321 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 PFASO15067 1338 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 SNX3O60493 162 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 PSAPP07602 524 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 FDX1P10109 184 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 ITGA8P53708 1063 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 DPY19L2P1Q6NXN4 242 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 SLC17A8Q8NDX2 589 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 SPIRE2Q8WWL2 714 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 BSNDQ8WZ55 320 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 CENPTQ96BT3 561 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 MIEF2Q96C03 454 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 TRIM6Q9C030 488 aaPredicted RBP11.53□□□□□ -0.56
BRF1-204ENST00000392557 FHDC1Q9C0D6 1143 aaPredicted RBP11.53□□□□□ -0.56
BRF1-204ENST00000392557 WNT8AQ9H1J5 351 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 ZNF408Q9H9D4 720 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 ZNF112Q9UJU3 913 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 TTC7AQ9ULT0 858 aaPredicted RBP11.53□□□□□ -0.56
BRF1-204ENST00000392557 BRCA2P51587 3418 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 RASA4BC9J798 803 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 RASA4O43374 803 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 MGRN1O60291 552 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 MARK3P27448 753 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 CHKAP35790 457 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 POLGP54098 1239 aaPredicted RBP11.53□□□□□ -0.56
BRF1-204ENST00000392557 MTM1Q13496 603 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 EAPPQ56P03 285 aaPredicted RBP11.53□□□□□ -0.56
BRF1-204ENST00000392557 PRUNE1Q86TP1 453 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 NOP9Q86U38 636 aaKnown RBP11.53□□□□□ -0.56
BRF1-204ENST00000392557 DHX38Q92620 1227 aaKnown RBP11.53□□□□□ -0.56
BRF1-204ENST00000392557 SPDL1Q96EA4 605 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 BORCS6Q96GS4 357 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 MKNK1Q9BUB5 465 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 EPB41L4BQ9H329 900 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 AFG3L2Q9Y4W6 797 aa11.53□□□□□ -0.56
BRF1-204ENST00000392557 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.53□□□□□ -0.56
BRF1-204ENST00000392557 WDR91A4D1P6 747 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 CFAP73A6NFT4 308 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 LRRIQ4A6NIV6 560 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 IRF6O14896 467 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 IFNB1P01574 187 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 CNGA1P29973 690 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 SESN3P58005 492 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 COPS2P61201 443 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 STXBP2Q15833 593 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 CCDC125Q86Z20 511 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 PASD1Q8IV76 773 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 REPS2Q8NFH8 660 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 KIFAP3Q92845 792 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 GPRASP2Q96D09 838 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 SGIP1Q9BQI5 828 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 VPS37BQ9H9H4 285 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 CHST7Q9NS84 486 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 KLHL11Q9NVR0 708 aa11.52□□□□□ -0.56
BRF1-204ENST00000392557 MAP3K20Q9NYL2 800 aaKnown RBP11.52□□□□□ -0.56
BRF1-204ENST00000392557 LTBP3Q9NS15 1303 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 PGK2P07205 417 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 ADRB2P07550 413 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 KCNA2P16389 499 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 ATF7P17544 494 aaPredicted RBP11.52□□□□□ -0.57
BRF1-204ENST00000392557 PTGIRP43119 386 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 MFAP3P55082 362 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 SP2Q02086 613 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 SNRNP35Q16560 246 aaKnown RBP11.52□□□□□ -0.57
BRF1-204ENST00000392557 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.52□□□□□ -0.57
BRF1-204ENST00000392557 PCDHB18PQ96TA0 734 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 PI4K2AQ9BTU6 479 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 ADAM7Q9H2U9 754 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 TBX20Q9UMR3 447 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
BRF1-204ENST00000392557 LAMA3Q16787 3333 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 UBE4BO95155 1302 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 KIF13BQ9NQT8 1826 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 PCK1P35558 622 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.57
BRF1-204ENST00000392557 ARHGEF18Q6ZSZ5 1173 aa11.52□□□□□ -0.57
BRF1-204ENST00000392557 ZDHHC14Q8IZN3 488 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms