RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 FRMD5Q7Z6J6 570 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 DTWD2Q8NBA8 298 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 DDX12PQ92771 950 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 EPSTI1Q96J88 318 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 FOXQ1Q9C009 403 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 IKZF4Q9H2S9 585 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 CYP4F11Q9HBI6 524 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 DAXXQ9UER7 740 aaPredicted RBP18.07■□□□□ 0.48
PTPRK-208ENST00000392449 PPEF2O14830 753 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 KRT18P05783 430 aaKnown RBP18.07■□□□□ 0.48
PTPRK-208ENST00000392449 POU2F2P09086 479 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 CLTAP09496 248 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 CEBPBP17676 345 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 MARCKSP29966 332 aaPredicted RBP18.07■□□□□ 0.48
PTPRK-208ENST00000392449 LONP1P36776 959 aaKnown RBP18.07■□□□□ 0.48
PTPRK-208ENST00000392449 ZNF131P52739 623 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 ZC2HC1CQ53FD0 456 aaPredicted RBP18.07■□□□□ 0.48
PTPRK-208ENST00000392449 TCEAL4Q96EI5 215 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 MCRS1Q96EZ8 462 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 FIZ1Q96SL8 496 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 RTP3Q9BQQ7 232 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 IRF2BPLQ9H1B7 796 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 PARVGQ9HBI0 331 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 SLC2A4RGQ9NR83 387 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 KCNG1Q9UIX4 513 aa18.07■□□□□ 0.48
PTPRK-208ENST00000392449 MRPS23Q9Y3D9 190 aaKnown RBP18.07■□□□□ 0.48
PTPRK-208ENST00000392449 ZFP37Q9Y6Q3 630 aaPredicted RBP18.07■□□□□ 0.48
PTPRK-208ENST00000392449 ANK1P16157 1881 aa18.06■□□□□ 0.48
PTPRK-208ENST00000392449 ARHGEF37A1IGU5 675 aa18.06■□□□□ 0.48
PTPRK-208ENST00000392449 TRAK2O60296 914 aa18.06■□□□□ 0.48
PTPRK-208ENST00000392449 LRRN2O75325 713 aa18.06■□□□□ 0.48
PTPRK-208ENST00000392449 LRG1P02750 347 aa18.06■□□□□ 0.48
PTPRK-208ENST00000392449 ATF2P15336 505 aa18.06■□□□□ 0.48
PTPRK-208ENST00000392449 ELF1P32519 619 aa18.06■□□□□ 0.48
PTPRK-208ENST00000392449 PTPAQ15257 358 aa18.06■□□□□ 0.48
PTPRK-208ENST00000392449 ANGPT1Q15389 498 aa18.06■□□□□ 0.48
PTPRK-208ENST00000392449 FAM212AQ96EL1 285 aa18.06■□□□□ 0.48
PTPRK-208ENST00000392449 CORO1BQ9BR76 489 aa18.06■□□□□ 0.48
PTPRK-208ENST00000392449 INSL5Q9Y5Q6 135 aa18.06■□□□□ 0.48
PTPRK-208ENST00000392449 ANKRD63C9JTQ0 380 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 H0YCG3 227 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 H7C4K7 107 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 SLC26A4O43511 780 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 BMP15O95972 392 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 OR4Q2P0C623 313 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 CCR2P41597 374 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 CEBPZQ03701 1054 aaKnown RBP18.05■□□□□ 0.48
PTPRK-208ENST00000392449 PPP2R3AQ06190 1150 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 ADCY1Q08828 1119 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 SNW1Q13573 536 aaKnown RBP18.05■□□□□ 0.48
PTPRK-208ENST00000392449 ZBTB6Q15916 424 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 ZNF280DQ6N043 979 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 RNF19BQ6ZMZ0 732 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 TCEAL8Q8IYN2 117 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 LARP4BQ92615 738 aaKnown RBP18.05■□□□□ 0.48
PTPRK-208ENST00000392449 CLIC6Q96NY7 704 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 PLA2G2FQ9BZM2 168 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 PLEKHA5Q9HAU0 1116 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 PCDHB8Q9UN66 801 aa18.05■□□□□ 0.48
PTPRK-208ENST00000392449 A0A0B4J269 797 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 OGTO15294 1046 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 TBCAO75347 108 aaKnown RBP18.04■□□□□ 0.48
PTPRK-208ENST00000392449 VNN2O95498 520 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 PIGRP01833 764 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 GLULP15104 373 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 LRPAP1P30533 357 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 NBL1P41271 181 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 CDR1P51861 262 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 RESTQ13127 1097 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 MTSS1LQ765P7 747 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 DYMQ7RTS9 669 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 HS6ST3Q8IZP7 471 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 PGLYRP2Q96PD5 576 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 MSTO1Q9BUK6 570 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 RPF1Q9H9Y2 349 aaKnown RBP18.04■□□□□ 0.48
PTPRK-208ENST00000392449 FBXO2Q9UK22 296 aaPredicted RBP18.04■□□□□ 0.48
PTPRK-208ENST00000392449 KCNH3Q9ULD8 1083 aa18.04■□□□□ 0.48
PTPRK-208ENST00000392449 TSC2P49815 1807 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 PROB1E7EW31 1015 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 M0QZQ0 153 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 NFICP08651 508 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 CPB1P15086 417 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 PTPN2P17706 415 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 SYT1P21579 422 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 ACOT2P49753 483 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 PRSS36Q5K4E3 855 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 JADE1Q6IE81 842 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 APPL2Q8NEU8 664 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 KCNN1Q92952 543 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 CCSER1Q9C0I3 900 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 DLGAP2Q9P1A6 1054 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 CEP72Q9P209 647 aa18.03■□□□□ 0.48
PTPRK-208ENST00000392449 UBQLN1Q9UMX0 589 aaKnown RBP18.03■□□□□ 0.48
PTPRK-208ENST00000392449 MIA3Q5JRA6 1907 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 PRR23AA6NEV1 266 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 GJA1P17302 382 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 CD72P21854 359 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 DDIT3P35638 169 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 GTF2BQ00403 316 aa18.02■□□□□ 0.48
PTPRK-208ENST00000392449 YWHAHQ04917 246 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms